CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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fgenesh1_pm.sca_40_chr12_1_0000005
(
Nectria haematococca
)
Zinc cluster
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00172 (Zn_clus)
IPR001138
fgenesh1_pm.sca_40_chr12_1_0000005
T390353_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
fgenesh1_pm.sca_40_chr12_1_0000005
Zinc cluster
18
55
RACQRCKTLRRGCNEYRPCRRCVDAGLGEQCAAQSGPS
Links
Other
Zinc cluster
family TFs
Other
Nectria haematococca
TFs
10 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
GLRG_06576
Colletotrichum graminicola
GLRG_06576
N
0.541
CH063_09365
Colletotrichum higginsianum
CH063_09365
N
0.571
CSUB01_06477
Colletotrichum sublineola
CSUB01_06477
N
0.585
FFUJ_06886
Fusarium fujikuroi
FFUJ_06886
N
0.630
FGRRES_10660
Fusarium graminearum
FGRRES_10660
N
0.630
FPSE_05688
Fusarium pseudograminearum
FPSE_05688
N
0.630
NechaG97478
Fusarium solani
NechaG97478
N
0.683
MANI_014863
Metarhizium anisopliae
MANI_014863
N
0.556
MGU_10642
Metarhizium guizhouense
MGU_10642
N
0.568
MAJ_04717
Metarhizium majus
MAJ_04717
N
0.568