CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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fgenesh1_pm.sca_40_chr12_1_0000005
(
Nectria haematococca
)
Zinc cluster
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00172 (Zn_clus)
IPR001138
fgenesh1_pm.sca_40_chr12_1_0000005
T390353_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
fgenesh1_pm.sca_40_chr12_1_0000005
Zinc cluster
18
55
RACQRCKTLRRGCNEYRPCRRCVDAGLGEQCAAQSGPS
Links
Other
Zinc cluster
family TFs
Other
Nectria haematococca
TFs
10 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
NechaG97478
Fusarium solani
NechaG97478
N
0.683
FFUJ_06886
Fusarium fujikuroi
FFUJ_06886
N
0.630
FGRRES_10660
Fusarium graminearum
FGRRES_10660
N
0.630
FPSE_05688
Fusarium pseudograminearum
FPSE_05688
N
0.630
CSUB01_06477
Colletotrichum sublineola
CSUB01_06477
N
0.585
CH063_09365
Colletotrichum higginsianum
CH063_09365
N
0.571
MAJ_04717
Metarhizium majus
MAJ_04717
N
0.568
MGU_10642
Metarhizium guizhouense
MGU_10642
N
0.568
MANI_014863
Metarhizium anisopliae
MANI_014863
N
0.556
GLRG_06576
Colletotrichum graminicola
GLRG_06576
N
0.541