CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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NCU01243
(
Neurospora crassa
)
Zinc cluster
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00172 (Zn_clus)
IPR001138
NCU01243
T390569_2.00
Misc (2018-Jan-19)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
NCU01243
M02588_2.00
Neurospora crassa
NNNSCGN
NCGSNNN
PBM
Weirauch et al.(2014)
pTH8917
(Direct)
(Direct)
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
For this family, TFs with SR scores >
0.537
will likely have a similar motif
Experimental Constructs
Motif ID
Domain
From
To
Sequence
M02588_2.00
Zinc cluster
52
91
RCQRCRKSKKGCDRQRPCGRCKDAGIPAEQCISEDEGNGR
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
NCU01243
Zinc cluster
511
550
RCQRCRKSKKGCDRQRPCGRCKDAGIPAEQCISEDEGNGR
Links
Other
Zinc cluster
family TFs
Other
Neurospora crassa
TFs
144 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
AMAM018366
Anopheles maculatus
AMAM018366
I
0.000
DME_0000428901
Dracunculus medinensis
DME_0000428901
N
0.000
GPUH_0000060701
Gongylonema pulchrum
GPUH_0000060701
N
0.000
nLs.2.1.2.g01524
Litomosoides sigmodontis
nLs.2.1.2.g01524
N
0.000
LOAG_10192
Loa loa
LOAG_10192
N
0.000
nRc.2.0.1.g36178
Romanomermis culicivorax
nRc.2.0.1.g36178
N
0.000
L596_g27159
Steinernema carpocapsae
L596_g27159
N
0.000
L893_g10963
Steinernema glaseri
L893_g10963
N
0.000
L892_g23853
Steinernema scapterisci
L892_g23853
N
0.000
SMUV_0000932701
Syphacia muris
SMUV_0000932701
N
0.000
TCNE_0001358801
Toxocara canis
TCNE_0001358801
N
0.000
D917_05875
Trichinella nativa
D917_05875
N
0.000
EFV53676
Trichinella spiralis
EFV53676
N
0.000
TMUE_s0106001300
Trichuris muris
TMUE_s0106001300
N
0.000
D918_00980
Trichuris suis
D918_00980
N
0.000
TTRE_0000179301
Trichuris trichiura
TTRE_0000179301
N
0.000