CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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nLs.2.1.2.g01524
(
Litomosoides sigmodontis
)
Paired box
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00292 (PAX)
IPR001523
nLs.2.1.2.g01524
T312832_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
nLs.2.1.2.t01524-RA
Paired box
1
121
MNQLGGIYANGRPLPAHLRECIIQMAASGTKPCQISRQLRISHGCVSKILSRYRNTGSIRPGKIGGSKPKKSLPQVVTAIAIYKHCRPSMFSWEIRSRLISDGVCSAFNVPSISSISRIIR
Links
Other
Paired box
family TFs
Other
Litomosoides sigmodontis
TFs
22 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
LOAG_10192
Loa loa
LOAG_10192
N
0.909
WUBG_12629
Wuchereria bancrofti
WUBG_12629
N
0.901
Bm9831
Brugia malayi
Bm9831
N
0.893
OFLC_0000060901
Onchocerca flexuosa
OFLC_0000060901
N
0.864
BTMF_0000738101
Brugia timori
BTMF_0000738101
N
0.863
TCNE_0001358801
Toxocara canis
TCNE_0001358801
N
0.852
DME_0000428901
Dracunculus medinensis
DME_0000428901
N
0.810
nAv.1.0.1.g10245
Acanthocheilonema viteae
nAv.1.0.1.g10245
N
0.804
SMUV_0000932701
Syphacia muris
SMUV_0000932701
N
0.800
L596_g27159
Steinernema carpocapsae
L596_g27159
N
0.792
L892_g23853
Steinernema scapterisci
L892_g23853
N
0.792
L893_g10963
Steinernema glaseri
L893_g10963
N
0.792
WBGene00247281
Onchocerca volvulus
WBGene00247281
N
0.777
nOo.2.0.1.g09704
Onchocerca ochengi
nOo.2.0.1.g09704
N
0.769
GPUH_0000060701
Gongylonema pulchrum
GPUH_0000060701
N
0.765
D917_05875
Trichinella nativa
D917_05875
N
0.763
D918_00980
Trichuris suis
D918_00980
N
0.752
TMUE_s0106001300
Trichuris muris
TMUE_s0106001300
N
0.752
TTRE_0000179301
Trichuris trichiura
TTRE_0000179301
N
0.752
EFV53676
Trichinella spiralis
EFV53676
N
0.728
SBAD_0001324601
Soboliphyme baturini
SBAD_0001324601
N
0.727
nRc.2.0.1.g36178
Romanomermis culicivorax
nRc.2.0.1.g36178
N
0.718