CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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NCU05308
(
Neurospora crassa
)
Zinc cluster
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00172 (Zn_clus)
IPR001138
NCU05308
T390608_2.00
Misc (2018-Jan-19)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
NCU05308
M02610_2.00
Neurospora crassa
CGGRNATA
TATNYCCG
PBM
Weirauch et al.(2014)
pTH9681
(Direct)
(Direct)
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
For this family, TFs with SR scores >
0.537
will likely have a similar motif
Experimental Constructs
Motif ID
Domain
From
To
Sequence
M02610_2.00
Zinc cluster
52
88
LSCFECVERKTKCDRGRPHCLACIKRQTECKYAHVAN
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
NCU05308
Zinc cluster
276
312
LSCFECVERKTKCDRGRPHCLACIKRQTECKYAHVAN
Links
Other
Zinc cluster
family TFs
Other
Neurospora crassa
TFs
42 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Alligator_sinensis_CCG014285.1
Alligator sinensis
Alligator_sinensis_CCG014285.1
N
0.000
ENSAPLG00000014035
Anas platyrhynchos
ENSAPLG00000014035
N
0.000
Afo_R009911
Aptenodytes forsteri
Afo_R009911
N
0.000
BGLB002717
Biomphalaria glabrata
BGLB002717
N
0.000
estExt_fgenesh2_pg.C_1230031
Branchiostoma floridae
estExt_fgenesh2_pg.C_1230031
N
0.000
Brh_R012356
Buceros rhinoceros
Brh_R012356
N
0.000
Aan_R003320
Calypte anna
Aan_R003320
N
0.000
L3MBTL1
Cavia porcellus
ENSCPOG00000008941
N
0.000
CGI_10026935
Crassostrea gigas
CGI_10026935
N
0.000
ENSFALG00000012779
Ficedula albicollis
ENSFALG00000012779
N
0.000
Gfo_R014039
Geospiza fortis
Gfo_R014039
N
0.000
ENSLACG00000003590
Latimeria chalumnae
ENSLACG00000003590
N
0.000
L3MBTL1
Loxodonta africana
ENSLAFG00000012575
N
0.000
L3MBTL1
Meleagris gallopavo
ENSMGAG00000000827
N
0.000
Pvit_07756
Pogona vitticeps
Pvit_07756
N
0.000
Sakowv30043999m.g
Saccoglossus kowalevskii
Sakowv30043999m.g
N
0.000
SMAR015290
Strigamia maritima
SMAR015290
N
0.000
ENSTGUG00000003474
Taeniopygia guttata
ENSTGUG00000003474
N
0.000
ENSTBEG00000014200
Tupaia belangeri
ENSTBEG00000014200
N
0.000
Tal_R013237
Tyto alba
Tal_R013237
N
0.000