CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
NCU08527
(
Neurospora crassa
)
Zinc cluster
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00172 (Zn_clus)
IPR001138
NCU08527
T390648_2.00
Misc (2018-Jan-19)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
NCU08527
M02627_2.00
Neurospora crassa
NKYCGGCGNNN
NNNCGCCGRMN
PBM
Weirauch et al.(2014)
pTH8938
(Direct)
(Direct)
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
For this family, TFs with SR scores >
0.537
will likely have a similar motif
Experimental Constructs
Motif ID
Domain
From
To
Sequence
M02627_2.00
Zinc cluster
11
62
LACDRCHSQKLRCPRQDNYRTTKDGTSEQPAPCVRCERAKVACVFSPRQRRT
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
NCU08527
Zinc cluster
11
62
LACDRCHSQKLRCPRQDNYRTTKDGTSEQPAPCVRCERAKVACVFSPRQRRT
Links
Other
Zinc cluster
family TFs
Other
Neurospora crassa
TFs
7 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
F775_23182
Aegilops tauschii
F775_23182
I
BRADI2G53495
Brachypodium distachyon
BRADI2G53495
I
OBART01G35310
Oryza barthii
OBART01G35310
I
OB01G44140
Oryza brachyantha
OB01G44140
I
ORGLA01G0291800
Oryza glaberrima
ORGLA01G0291800
I
BGIOSGA004703
Oryza indica
BGIOSGA004703
I
OMERI01G32480
Oryza meridionalis
OMERI01G32480
I
ONIVA01G40340
Oryza nivara
ONIVA01G40340
I
OPUNC01G34270
Oryza punctata
OPUNC01G34270
N
ORUFI01G38660
Oryza rufipogon
ORUFI01G38660
I
OS01G0820700
Oryza sativa
OS01G0820700
I
Traes_3AL_2297D6E18
Triticum aestivum
Traes_3AL_2297D6E18
I
TRAES3BF081400030CFD_g
Triticum aestivum
TRAES3BF081400030CFD_g
I
Traes_3DL_48F7A19D2
Triticum aestivum
Traes_3DL_48F7A19D2
I