e_gw1.8.145.1 (Cryphonectria parasitica)
Zinc cluster

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00172 (Zn_clus) IPR001138 e_gw1.8.145.1 T391113_2.00 Superfamily (2010-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
NCU02307
M02594_2.00 		Neurospora crassa
NCGCGSBHAN
NTDVSCGCGN		 PBM
Weirauch et al.(2014)
pTH7901 		0.681 0.975
NCU02307
M02595_2.00 		Neurospora crassa
NNDAWATTWHNN
NNDWAATWTHNN		 PBM
Weirauch et al.(2014)
pTH8845 		0.681 0.975
For this family, TFs with SR scores > 0.537 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
e_gw1.8.145.1 Zinc cluster 112 151

Links

Other Zinc cluster family TFs
Other Cryphonectria parasitica TFs

74 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
F775_10096 Aegilops tauschii F775_10096 I
AMTR_s00002p00019320 Amborella trichopoda AMTR_s00002p00019320 I
Aquca_007_00571 Aquilegia coerulea Aquca_007_00571 N
Al_scaffold_0007_233 Arabidopsis lyrata Al_scaffold_0007_233 N
BHLH131 Arabidopsis thaliana AT4G38070 N
BRADI3G36610 Brachypodium distachyon BRADI3G36610 N
BRADI4G29990 Brachypodium distachyon BRADI4G29990 N
PK01498.1 Cannabis sativa PK01498.1 N
Ca_14981 Cicer arietinum Ca_14981 N
Cla022500 Citrullus lanatus Cla022500 N
Ciclev10002205m.g Citrus clementina Ciclev10002205m.g N
orange1.1g024930m.g Citrus sinensis orange1.1g024930m.g N
Thhalv10027500m.g Eutrema salsugineum Thhalv10027500m.g N
gene20797-v1.0-hybrid Fragaria vesca gene20797-v1.0-hybrid N
GLYMA14G36010 Glycine max GLYMA14G36010 N
GLYMA02G37720 Glycine max GLYMA02G37720 N
Gorai.009G230000 Gossypium raimondii Gorai.009G230000 N
MLOC_66385 Hordeum vulgare MLOC_66385 I
MLOC_12832 Hordeum vulgare MLOC_12832 N
LPERR08G12910 Leersia perrieri LPERR08G12910 I
LPERR09G06880 Leersia perrieri LPERR09G06880 I
Lus10003471.g Linum usitatissimum Lus10003471.g I
Lus10015734.g Linum usitatissimum Lus10015734.g I
Lus10042017.g Linum usitatissimum Lus10042017.g N
MDP0000562627 Malus domestica MDP0000562627 N
cassava34286.m1 Manihot esculenta cassava34286.m1 N
MTR_5g066080 Medicago truncatula MTR_5g066080 N
OBART08G15650 Oryza barthii OBART08G15650 I
ORGLA08G0137400 Oryza glaberrima ORGLA08G0137400 I
OGLUM08G16400 Oryza glumaepatula OGLUM08G16400 I
BGIOSGA029777 Oryza indica BGIOSGA029777 I
BGIOSGA026937 Oryza indica BGIOSGA026937 I
OMERI09G07780 Oryza meridionalis OMERI09G07780 I
OMERI08G12930 Oryza meridionalis OMERI08G12930 I
ONIVA09G09550 Oryza nivara ONIVA09G09550 I
ONIVA08G16750 Oryza nivara ONIVA08G16750 I
OPUNC08G13730 Oryza punctata OPUNC08G13730 I
ORUFI08G17560 Oryza rufipogon ORUFI08G17560 I
ORUFI09G10670 Oryza rufipogon ORUFI09G10670 I
OS09G0410700 Oryza sativa OS09G0410700 I
OS08G0432800 Oryza sativa OS08G0432800 I
Pavir.Ba01821 Panicum virgatum Pavir.Ba01821 N
Pavir.Bb02155 Panicum virgatum Pavir.Bb02155 N
PRUPE_ppa026166mg Prunus persica PRUPE_ppa026166mg N
29908.m006255 Ricinus communis 29908.m006255 N
Si030496m.g Setaria italica Si030496m.g N
Si013911m.g Setaria italica Si013911m.g I
Solyc04g014360.2 Solanum lycopersicum Solyc04g014360.2 N
PGSC0003DMG400023577 Solanum tuberosum PGSC0003DMG400023577 N
Sb07g021170 Sorghum bicolor Sb07g021170 I
Sb02g024460 Sorghum bicolor Sb02g024460 N
Traes_5BL_CF90A7CAE Triticum aestivum Traes_5BL_CF90A7CAE N
Traes_4DL_7BD3165FB Triticum aestivum Traes_4DL_7BD3165FB I
Traes_4BL_A2B32FCEE Triticum aestivum Traes_4BL_A2B32FCEE I
Traes_4AS_DD16F89E7 Triticum aestivum Traes_4AS_DD16F89E7 I
TRIUR3_31897 Triticum urartu TRIUR3_31897 I
VIT_18s0001g07410 Vitis vinifera VIT_18s0001g07410 N
GRMZM2G526668 Zea mays GRMZM2G526668 I
GRMZM2G176141 Zea mays GRMZM2G176141 N
GRMZM2G107276 Zea mays GRMZM2G107276 I