CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Minc00617
(
Meloidogyne incognita
)
ABF1
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF04684 (BAF1_ABF1)
IPR006774
Minc00617
T000123_2.00
Superfamily (2010-Oct-26)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Minc00617a
ABF1
7
162
NPAMGFPPNAHQIVTMQQNAQQLAAQQQQQQQQAQQQQQQQQQQVIKREPAAPTMAPSAGVQQQSNSSNNSASAAAAAAAAAQNMEFMATVQNKDLLEELKVQSQAIVHKTITNGTPDGRQQMIRHYRCNRHRHQEKCPFKMLAIQSDDGTFKVFR
Minc00617b
FLYWCH
126
172
TPDGRQQMIRHYRCNRHRHQEKCPFKMLAIQSDDGTFKVFRSGEHNH
Minc00617b
FLYWCH
199
254
LRQGQRVTVHKTTFHGKNRHFRCNRHRHNERCMFKLLAVTENNGTINVFRSGEHNH
Minc00617c
FLYWCH
122
168
TPDGRQQMIRHYRCNRHRHQEKCPFKMLAIQSDDGTFKVFRSGEHNH
Minc00617c
FLYWCH
195
250
LRQGQRVTVHKTTFHGKNRHFRCNRHRHNERCMFKLLAVTENNGTINVFRSGEHNH
Minc00617d
ABF1
7
162
NPAMGFPPNAHQIVTMQQNAQQLAAQQQQQQQQAQQQQQQQQQQVIKREPAAPTMAPSAGVQQQSNSSNNSASAAAAAAAAAQNMEFMATVQNKDLLEELKVQSQAIVHKTITNGTPDGRQQMIRHYRCNRHRHQEKCPFKMLAIQSDDGTFKVFR
Minc00617e
FLYWCH
122
168
TPDGRQQMIRHYRCNRHRHQEKCPFKMLAIQSDDGTFKVFRSGEHNH
Minc00617e
FLYWCH
195
250
LRQGQRVTVHKTTFHGKNRHFRCNRHRHNERCMFKLLAVTENNGTINVFRSGEHNH
Links
Other
ABF1
family TFs
Other
Meloidogyne incognita
TFs
2 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Minc03772
Meloidogyne incognita
Minc03772
N
1.000