GRMZM2G060876 (Zea mays)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00847 (AP2) IPR001471 GRMZM2G060876 T002122_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
LEP
M06661_2.00 		Arabidopsis thaliana
NBCKCCGCCGYHDHHDYHNHH
DDNDRHDDHDRCGGCGGMGVN		 Dap-seq
OMalley et al.(2016)
LEP_col_a 		0.732 0.800
Q84J59_MAIZE
M09717_2.00 		Zea mays Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$BD1_01 		0.703 0.720
ERF087
M06573_2.00 		Arabidopsis thaliana
HHDYCKCCGCCGYYD
HRRCGGCGGMGRHDD		 Dap-seq
OMalley et al.(2016)
AT1G28160_col_a 		0.698 0.740
ERF087
M06574_2.00 		Arabidopsis thaliana
HDYCKCCGCCGYCR
YGRCGGCGGMGRHD		 Dap-seq
OMalley et al.(2016)
AT1G28160_colamp_a 		0.698 0.740
ERF086
M06663_2.00 		Arabidopsis thaliana
HHDYCKCCGCCGYHD
HDRCGGCGGMGRHDD		 Dap-seq
OMalley et al.(2016)
PUCHI_col_a 		0.697 0.740
ERF086
M06664_2.00 		Arabidopsis thaliana
NNNNHDHCKCCGCCGYHDHHDHNNN
NNNDHDDHDRCGGCGGMGDHDNNNN		 Dap-seq
OMalley et al.(2016)
PUCHI_colamp_a 		0.697 0.740
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
GRMZM2G060876_P01 AP2 166 217

Links

Other AP2 family TFs
Other Zea mays TFs

187 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
BGIOSGA016321 Oryza indica BGIOSGA016321 I 0.744
GRMZM2G023708 Zea mays GRMZM2G023708 I 0.744
GRMZM2G079825 Zea mays GRMZM2G079825 I 0.744
LPERR04G07940 Leersia perrieri LPERR04G07940 I 0.744
OB04G18290 Oryza brachyantha OB04G18290 I 0.744
OGLUM04G10880 Oryza glumaepatula OGLUM04G10880 I 0.744
OMERI04G09670 Oryza meridionalis OMERI04G09670 I 0.744
ONIVA04G09120 Oryza nivara ONIVA04G09120 I 0.744
OPUNC04G09190 Oryza punctata OPUNC04G09190 I 0.744
ORUFI04G12370 Oryza rufipogon ORUFI04G12370 I 0.744
OS04G0399800 Oryza sativa OS04G0399800 I 0.744
Sb06g014800 Sorghum bicolor Sb06g014800 I 0.744
Si012587m.g Setaria italica Si012587m.g I 0.744
Pavir.Gb01913 Panicum virgatum Pavir.Gb01913 I 0.744
Pavir.J16868 Panicum virgatum Pavir.J16868 I 0.744
Cla009214 Citrullus lanatus Cla009214 I 0.741
MLOC_73522 Hordeum vulgare MLOC_73522 I 0.738
Traes_2AL_F24D031AA Triticum aestivum Traes_2AL_F24D031AA I 0.738
Traes_2BL_5DC21F3CD Triticum aestivum Traes_2BL_5DC21F3CD I 0.738
Traes_2BL_970693C1F Triticum aestivum Traes_2BL_970693C1F I 0.738
Traes_2BL_E7871AFBA Triticum aestivum Traes_2BL_E7871AFBA I 0.738
TRIUR3_35273 Triticum urartu TRIUR3_35273 I 0.738
GSMUA_Achr10G17370_001 Musa acuminata GSMUA_Achr10G17370_001 I 0.735
Pavir.Aa01903 Panicum virgatum Pavir.Aa01903 I 0.735
Pavir.Ab01422 Panicum virgatum Pavir.Ab01422 I 0.735
PRUPE_ppa018569mg Prunus persica PRUPE_ppa018569mg I 0.734
TCM_008270 Theobroma cacao TCM_008270 I 0.734
Pm007113 Prunus mume Pm007113 I 0.734
gene22872-v1.0-hybrid Fragaria vesca gene22872-v1.0-hybrid I 0.734
MDP0000263008 Malus domestica MDP0000263008 I 0.734
MDP0000264124 Malus domestica MDP0000264124 I 0.734
GSMUA_Achr3G02360_001 Musa acuminata GSMUA_Achr3G02360_001 I 0.733
LEP Arabidopsis thaliana AT5G13910 D 0.732
PGSC0003DMG400002185 Solanum tuberosum PGSC0003DMG400002185 I 0.732
PGSC0003DMG400002191 Solanum tuberosum PGSC0003DMG400002191 I 0.732
POPTR_0001s12820 Populus trichocarpa POPTR_0001s12820 I 0.732
POPTR_0001s15710 Populus trichocarpa POPTR_0001s15710 I 0.732
POPTR_0003s15940 Populus trichocarpa POPTR_0003s15940 I 0.732
LEP Arabidopsis lyrata scaffold_601402.1 I 0.732
Solyc11g045680.1 Solanum lycopersicum Solyc11g045680.1 I 0.732
LEP Vitis vinifera VIT_14s0068g00860 I 0.732
30128.m008571 Ricinus communis 30128.m008571 I 0.732
cassava11359.m1 Manihot esculenta cassava11359.m1 I 0.732
cassava11599.m1 Manihot esculenta cassava11599.m1 I 0.732
cassava21524.m1 Manihot esculenta cassava21524.m1 I 0.732
cassava21525.m1 Manihot esculenta cassava21525.m1 I 0.732
mgf019421m Mimulus guttatus mgf019421m I 0.732
Bostr.2902s0126 Boechera stricta Bostr.2902s0126 I 0.732
Cagra.5588s0020 Capsella grandiflora Cagra.5588s0020 I 0.732
Carubv10002480m.g Capsella rubella Carubv10002480m.g I 0.732
Eucgr.B03565 Eucalyptus grandis Eucgr.B03565 I 0.732
Eucgr.I01576 Eucalyptus grandis Eucgr.I01576 I 0.732
Gorai.005G197800 Gossypium raimondii Gorai.005G197800 I 0.732
SapurV1A.0122s0040 Salix purpurea SapurV1A.0122s0040 I 0.732
SapurV1A.0210s0020 Salix purpurea SapurV1A.0210s0020 I 0.732
SapurV1A.0444s0130 Salix purpurea SapurV1A.0444s0130 I 0.732
SapurV1A.0444s0140 Salix purpurea SapurV1A.0444s0140 I 0.732
Thhalv10015796m.g Eutrema salsugineum Thhalv10015796m.g I 0.732
GLYMA02G07460 Glycine max GLYMA02G07460 I 0.731
chr1.CM0222.280.nd Lotus japonicus chr1.CM0222.280.nd I 0.731
Bo3g009410 Brassica oleracea Bo3g009410 I 0.730
Bo9g166320 Brassica oleracea Bo9g166320 I 0.730
Bra008793 Brassica rapa Bra008793 I 0.730
POPTR_0003s07540 Populus trichocarpa POPTR_0003s07540 I 0.730
Solyc11g045690.1 Solanum lycopersicum Solyc11g045690.1 I 0.730
30131.m006951 Ricinus communis 30131.m006951 I 0.730
Ciclev10017494m.g Citrus clementina Ciclev10017494m.g I 0.730
evm.TU.supercontig_70.47 Carica papaya evm.TU.supercontig_70.47 I 0.730
orange1.1g037093m.g Citrus sinensis orange1.1g037093m.g I 0.730
GRMZM2G047999 Zea mays GRMZM2G047999 I 0.729
LPERR02G14670 Leersia perrieri LPERR02G14670 I 0.729
OB02G26200 Oryza brachyantha OB02G26200 I 0.729
AMTR_s00016p00238800 Amborella trichopoda AMTR_s00016p00238800 I 0.728
BGIOSGA006366 Oryza indica BGIOSGA006366 I 0.728
OGLUM02G18720 Oryza glumaepatula OGLUM02G18720 I 0.728
OMERI04G06880 Oryza meridionalis OMERI04G06880 I 0.728
ORGLA02G0159100 Oryza glaberrima ORGLA02G0159100 I 0.728
ORUFI02G19410 Oryza rufipogon ORUFI02G19410 I 0.728
OS02G0520000 Oryza sativa OS02G0520000 I 0.728
BRADI3G44470 Brachypodium distachyon BRADI3G44470 I 0.727
Si019641m.g Setaria italica Si019641m.g I 0.726
Lus10035129.g Linum usitatissimum Lus10035129.g I 0.726
GLYMA16G26460 Glycine max GLYMA16G26460 I 0.725
Ca_08291 Cicer arietinum Ca_08291 I 0.724
Bo2g011600 Brassica oleracea Bo2g011600 I 0.723
Bra023440 Brassica rapa Bra023440 I 0.723
MTR_7g084370 Medicago truncatula MTR_7g084370 I 0.721
Bra006222 Brassica rapa Bra006222 I 0.720
GLYMA16G05070 Glycine max GLYMA16G05070 I 0.718
Aquca_015_00126 Aquilegia coerulea Aquca_015_00126 I 0.715
SapurV1A.1120s0010 Salix purpurea SapurV1A.1120s0010 I 0.715
MDP0000778140 Malus domestica MDP0000778140 I 0.709
TCM_017382 Theobroma cacao TCM_017382 I 0.708
Cucsa.300100 Cucumis sativus Cucsa.300100 I 0.708
Thhalv10009328m.g Eutrema salsugineum Thhalv10009328m.g I 0.706
BGIOSGA023741 Oryza indica BGIOSGA023741 I 0.703
BRADI1G18580 Brachypodium distachyon BRADI1G18580 I 0.703
GLYMA07G37990 Glycine max GLYMA07G37990 I 0.703
GLYMA17G02711 Glycine max GLYMA17G02711 I 0.703
GRMZM2G307119 Zea mays GRMZM2G307119 I 0.703
GRMZM2G458437 Zea mays GRMZM2G458437 I 0.703
LPERR07G22580 Leersia perrieri LPERR07G22580 I 0.703
OBART07G25780 Oryza barthii OBART07G25780 I 0.703
OGLUM07G25800 Oryza glumaepatula OGLUM07G25800 I 0.703
OMERI07G22420 Oryza meridionalis OMERI07G22420 I 0.703
ONIVA07G25390 Oryza nivara ONIVA07G25390 I 0.703
OPUNC07G24180 Oryza punctata OPUNC07G24180 I 0.703
ORGLA07G0201100 Oryza glaberrima ORGLA07G0201100 I 0.703
ORUFI07G26720 Oryza rufipogon ORUFI07G26720 I 0.703
OS07G0669500 Oryza sativa OS07G0669500 I 0.703
PRUPE_ppa023203mg Prunus persica PRUPE_ppa023203mg I 0.703
Q84J59_MAIZE Zea mays Q84J59_MAIZE D 0.703
Si032771m.g Setaria italica Si032771m.g I 0.703
Pm008145 Prunus mume Pm008145 I 0.703
evm.TU.supercontig_16.148 Carica papaya evm.TU.supercontig_16.148 I 0.703
gene06790-v1.0-hybrid Fragaria vesca gene06790-v1.0-hybrid I 0.703
Pavir.Ba00192 Panicum virgatum Pavir.Ba00192 I 0.703
LjT18C07.30.nc Lotus japonicus LjT18C07.30.nc I 0.703
TCM_021164 Theobroma cacao TCM_021164 I 0.701
29726.m004013 Ricinus communis 29726.m004013 I 0.701
cassava46974.m1 Manihot esculenta cassava46974.m1 I 0.701
Cucsa.095860 Cucumis sativus Cucsa.095860 I 0.701
Eucgr.H03870 Eucalyptus grandis Eucgr.H03870 I 0.701
Gorai.006G264300 Gossypium raimondii Gorai.006G264300 I 0.701
Lus10033963.g Linum usitatissimum Lus10033963.g I 0.701
MDP0000467753 Malus domestica MDP0000467753 I 0.701
AMTR_s00057p00191330 Amborella trichopoda AMTR_s00057p00191330 I 0.700
MTR_4g119270 Medicago truncatula MTR_4g119270 I 0.700
PGSC0003DMG400022667 Solanum tuberosum PGSC0003DMG400022667 I 0.700
Solyc01g067540.1 Solanum lycopersicum Solyc01g067540.1 I 0.700
Ca_06835 Cicer arietinum Ca_06835 I 0.700
Gorai.005G058700 Gossypium raimondii Gorai.005G058700 I 0.700
cassava21600.m1 Manihot esculenta cassava21600.m1 I 0.699
Ciclev10006460m.g Citrus clementina Ciclev10006460m.g I 0.699
Ciclev10006861m.g Citrus clementina Ciclev10006861m.g I 0.699
orange1.1g044016m.g Citrus sinensis orange1.1g044016m.g I 0.699
orange1.1g046280m.g Citrus sinensis orange1.1g046280m.g I 0.699
ERF087 Arabidopsis thaliana AT1G28160 D 0.698
Bo3g143080 Brassica oleracea Bo3g143080 I 0.698
Bo7g048420 Brassica oleracea Bo7g048420 I 0.698
Bra010901 Brassica rapa Bra010901 I 0.698
Bra030076 Brassica rapa Bra030076 I 0.698
fgenesh2_kg.1__2978__AT1G28160.1 Arabidopsis lyrata fgenesh2_kg.1__2978__AT1G28160.1 I 0.698
Cagra.1822s0047 Capsella grandiflora Cagra.1822s0047 I 0.698
Carubv10012143m.g Capsella rubella Carubv10012143m.g I 0.698
Gorai.008G155600 Gossypium raimondii Gorai.008G155600 I 0.698
ERF086 Arabidopsis thaliana AT5G18560 D 0.697
Bo2g016580 Brassica oleracea Bo2g016580 I 0.697
Bo3g013220 Brassica oleracea Bo3g013220 I 0.697
Bo5g054550 Brassica oleracea Bo5g054550 I 0.697
Bo9g154770 Brassica oleracea Bo9g154770 I 0.697
Bra002168 Brassica rapa Bra002168 I 0.697
Bra006466 Brassica rapa Bra006466 I 0.697
Bra023684 Brassica rapa Bra023684 I 0.697
PUCHI Arabidopsis lyrata fgenesh2_kg.6__1873__AT5G18560.1 I 0.697
PUCHI Populus trichocarpa POPTR_0008s22750 I 0.697
Cucsa.253400 Cucumis sativus Cucsa.253400 I 0.697
Aquca_017_00248 Aquilegia coerulea Aquca_017_00248 I 0.697
Bostr.26527s0355 Boechera stricta Bostr.26527s0355 I 0.697
Cagra.0712s0022 Capsella grandiflora Cagra.0712s0022 I 0.697
Carubv10002663m.g Capsella rubella Carubv10002663m.g I 0.697
SapurV1A.0022s0550 Salix purpurea SapurV1A.0022s0550 I 0.697
Thhalv10014022m.g Eutrema salsugineum Thhalv10014022m.g I 0.697
PGSC0003DMG400003431 Solanum tuberosum PGSC0003DMG400003431 I 0.696
PGSC0003DMG400004515 Solanum tuberosum PGSC0003DMG400004515 I 0.696
Gorai.011G188200 Gossypium raimondii Gorai.011G188200 I 0.694
GSMUA_Achr8G30180_001 Musa acuminata GSMUA_Achr8G30180_001 I 0.693
cassava32131.m1 Manihot esculenta cassava32131.m1 I 0.692
Ca_00514 Cicer arietinum Ca_00514 I 0.690
Aquca_022_00029 Aquilegia coerulea Aquca_022_00029 I 0.686
ONIVA02G20420 Oryza nivara ONIVA02G20420 I 0.684
mgf019807m Mimulus guttatus mgf019807m I 0.683
AMTR_s00049p00214620 Amborella trichopoda AMTR_s00049p00214620 I 0.681
GLYMA18G20962 Glycine max GLYMA18G20962 I 0.681
cassava32306.m1 Manihot esculenta cassava32306.m1 I 0.681
Cla023087 Citrullus lanatus Cla023087 I 0.680
Cucsa.394520 Cucumis sativus Cucsa.394520 I 0.680
GLYMA08G38800 Glycine max GLYMA08G38800 I 0.679
PGSC0003DMG400018613 Solanum tuberosum PGSC0003DMG400018613 I 0.679
Solyc05g013540.1 Solanum lycopersicum Solyc05g013540.1 I 0.679
DRNL Vitis vinifera VIT_00s0291g00030 I 0.679
Aquca_011_00500 Aquilegia coerulea Aquca_011_00500 I 0.679
Eucgr.H02495 Eucalyptus grandis Eucgr.H02495 I 0.679
gene22175-v1.0-hybrid Fragaria vesca gene22175-v1.0-hybrid I 0.679
MDP0000123172 Malus domestica MDP0000123172 I 0.679
Bo7g050300 Brassica oleracea Bo7g050300 I 0.677
Bra012499 Brassica rapa Bra012499 I 0.677