CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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MTR_4g111915
(
Medicago truncatula
)
AP2
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00847 (AP2)
IPR001471
MTR_4g111915
T002870_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
KEH32082
AP2
51
102
KKYLGVRQRPSGRWIAEIKDSSQKLRLWLGTFDRAEDAALSYDSAARLLRGR
Links
Other
AP2
family TFs
Other
Medicago truncatula
TFs
35 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
MTR_4g112490
Medicago truncatula
MTR_4g112490
N
0.829
Ca_06590
Cicer arietinum
Ca_06590
N
0.817
LjSGA_026378.1
Lotus japonicus
LjSGA_026378.1
N
0.765
GLYMA05G07690
Glycine max
GLYMA05G07690
I
0.761
GLYMA17G13320
Glycine max
GLYMA17G13320
I
0.761
PK28640.1
Cannabis sativa
PK28640.1
I
0.750
TCM_014471
Theobroma cacao
TCM_014471
I
0.746
Pm030235
Prunus mume
Pm030235
I
0.739
Lus10013764.g
Linum usitatissimum
Lus10013764.g
I
0.738
30174.m009031
Ricinus communis
30174.m009031
I
0.735
Lus10039171.g
Linum usitatissimum
Lus10039171.g
I
0.735
PRUPE_ppa018710mg
Prunus persica
PRUPE_ppa018710mg
I
0.728
MDP0000157628
Malus domestica
MDP0000157628
I
0.724
MDP0000197375
Malus domestica
MDP0000197375
I
0.724
AMTR_s00006p00266920
Amborella trichopoda
AMTR_s00006p00266920
I
0.723
cassava9303.m1
Manihot esculenta
cassava9303.m1
I
0.721
PGSC0003DMG400024606
Solanum tuberosum
PGSC0003DMG400024606
I
0.716
Aquca_026_00181
Aquilegia coerulea
Aquca_026_00181
I
0.715
SELMODRAFT_409196
Selaginella moellendorffii
SELMODRAFT_409196
N
0.713
SELMODRAFT_411255
Selaginella moellendorffii
SELMODRAFT_411255
N
0.713
Ca_00417
Cicer arietinum
Ca_00417
I
0.713
Cla019296
Citrullus lanatus
Cla019296
N
0.707
Cucsa.198700
Cucumis sativus
Cucsa.198700
N
0.707
cassava4119.m1
Manihot esculenta
cassava4119.m1
I
0.705
LPERR12G14340
Leersia perrieri
LPERR12G14340
I
0.699
VIT_17s0000g04480
Vitis vinifera
VIT_17s0000g04480
I
0.696
SELMODRAFT_73140
Selaginella moellendorffii
SELMODRAFT_73140
I
0.695
SELMODRAFT_73145
Selaginella moellendorffii
SELMODRAFT_73145
I
0.695
Ciclev10022187m.g
Citrus clementina
Ciclev10022187m.g
N
0.695
orange1.1g042608m.g
Citrus sinensis
orange1.1g042608m.g
N
0.695
AMTR_s00058p00066390
Amborella trichopoda
AMTR_s00058p00066390
I
0.694
Solyc03g114440.1
Solanum lycopersicum
Solyc03g114440.1
N
0.689
BRADI1G54450
Brachypodium distachyon
BRADI1G54450
I
0.678
MLOC_18783
Hordeum vulgare
MLOC_18783
I
0.678
SapurV1A.0081s0430
Salix purpurea
SapurV1A.0081s0430
I
0.677