CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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PBANKA_103430
(
Plasmodium berghei
)
AP2
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00847 (AP2)
IPR001471
PBANKA_103430
T004264_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
PF14_0079
M00576_2.00
Plasmodium falciparum
TGCMACCR
YGGTKGCA
PBM
Campbell et al.(2010)
PF14_0079
0.891
0.981
For this family, TFs with SR scores >
0.677
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
PBANKA_103430:pep
AP2
1284
1342
TGVSGVYFEKSRSSWTAQYKVSGGKRRAKRFLVTKNMTYEEIENVKQQCIAYRKQMEKE
Links
Other
AP2
family TFs
Other
Plasmodium berghei
TFs
5 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
PCHAS_103510
Plasmodium chabaudi
PCHAS_103510
I
0.891
PF14_0079
Plasmodium falciparum
PF14_0079
D
0.891
PKH_133910
Plasmodium knowlesi
PKH_133910
I
0.891
PVX_086035
Plasmodium vivax
PVX_086035
I
0.891
PY06900
Plasmodium yoelii
PY06900
I
0.891