CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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PF13_0097
(
Plasmodium falciparum
)
AP2
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00847 (AP2)
IPR001471
PF13_0097
T004309_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
PF13_0097
M00573_2.00
Plasmodium falciparum
NYTGAGCW
WGCTCARN
PBM
Campbell et al.(2010)
PF13_0097
(Direct)
(Direct)
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
For this family, TFs with SR scores >
0.677
will likely have a similar motif
Experimental Constructs
Motif ID
Domain
From
To
Sequence
M00573_2.00
AP2
2
55
PKIKGVRFDKSGRRWVASWSQNGNQKRQYFPVKKFGQAQAKYLAIYARIQAVNC
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
PF13_0097:pep
AP2
1052
1105
PKIKGVRFDKSGRRWVASWSQNGNQKRQYFPVKKFGQAQAKYLAIYARIQAVNC
Links
Other
AP2
family TFs
Other
Plasmodium falciparum
TFs
5 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
PBANKA_141570
Plasmodium berghei
PBANKA_141570
I
0.806
PCHAS_141750
Plasmodium chabaudi
PCHAS_141750
I
0.806
PY07205
Plasmodium yoelii
PY07205
I
0.806
PKH_141640
Plasmodium knowlesi
PKH_141640
I
0.803
PVX_122680
Plasmodium vivax
PVX_122680
I
0.803