CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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POPTR_0003s12120
(
Populus trichocarpa
)
AP2
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00847 (AP2)
IPR001471
POPTR_0003s12120
T004617_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
POPTR_0003s12120.1
AP2
12
62
PMYRGIRSRSGKWVSEIREPRKTTRIWLGTFPKPEMAAAAYDVAVLALKGA
Links
Other
AP2
family TFs
Other
Populus trichocarpa
TFs
8 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
SapurV1A.0045s0730
Salix purpurea
SapurV1A.0045s0730
N
0.704
VIT_02s0025g04440
Vitis vinifera
VIT_02s0025g04440
N
0.701
mgf025854m
Mimulus guttatus
mgf025854m
I
0.688
Eucgr.D01924
Eucalyptus grandis
Eucgr.D01924
I
0.684
cassava21336.m1
Manihot esculenta
cassava21336.m1
N
0.680
Ciclev10005869m.g
Citrus clementina
Ciclev10005869m.g
N
0.680
orange1.1g028004m.g
Citrus sinensis
orange1.1g028004m.g
N
0.680
Cla006314
Citrullus lanatus
Cla006314
N
0.679