Solyc05g051180.1 (Solanum lycopersicum)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00847 (AP2) IPR001471 Solyc05g051180.1 T005469_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Q5Y836_TOBAC
M09732_2.00 		Nicotiana tabacum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$ERF5_02 		0.734 0.857
ERF1B
M01619_2.00 		Arabidopsis thaliana
NMGCCGCCRN
NYGGCGGCKN		 PBM
Weirauch et al.(2014)
pTH8795 		0.707 0.857
ERF1B
M06626_2.00 		Arabidopsis thaliana
NHNNHDYMGCCGCCRYHDNHDNNNNNNN
NNNNNNNHDNHDRYGGCGGCKRHDNNDN		 Dap-seq
OMalley et al.(2016)
ERF1_col_a 		0.707 0.857
ERF1B
M06627_2.00 		Arabidopsis thaliana
MGCCGCCD
HGGCGGCK		 Dap-seq
OMalley et al.(2016)
ERF1_colamp_a 		0.707 0.857
ERF1B
M09703_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$ERF1_Q2_01 		0.707 0.857
ERF1B
M09704_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$ERF1_Q2 		0.707 0.857
ERF2_TOBAC
M09727_2.00 		Nicotiana tabacum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$ERF2_01 		0.693 0.755
ERF15
M00718_2.00 		Arabidopsis thaliana
NGSCGSCB
VGSCGSCN		 PBM
Chang et al.(2013)
pTH7336 		0.678 0.776
ERF15
M06604_2.00 		Arabidopsis thaliana
NNNHNNHDBMGCCGCCDY
RHGGCGGCKVHDNNDNNN		 Dap-seq
OMalley et al.(2016)
ERF15_colamp_a 		0.678 0.776
ERF15
M06605_2.00 		Arabidopsis thaliana
NNYHDYMGCCGCCRY
RYGGCGGCKRHDRNN		 Dap-seq
OMalley et al.(2016)
ERF15_col 		0.678 0.776
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Solyc05g051180.1.1 AP2 48 100

Links

Other AP2 family TFs
Other Solanum lycopersicum TFs

156 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
PGSC0003DMG400014610 Solanum tuberosum PGSC0003DMG400014610 I 0.798
PGSC0003DMG400023619 Solanum tuberosum PGSC0003DMG400023619 I 0.753
Solyc11g011750.1 Solanum lycopersicum Solyc11g011750.1 I 0.753
Solyc04g014530.1 Solanum lycopersicum Solyc04g014530.1 I 0.753
PGSC0003DMG400013257 Solanum tuberosum PGSC0003DMG400013257 I 0.743
mgf017485m Mimulus guttatus mgf017485m I 0.737
Q5Y836_TOBAC Nicotiana tabacum Q5Y836_TOBAC D 0.734
PGSC0003DMG400013256 Solanum tuberosum PGSC0003DMG400013256 I 0.726
mgf020623m Mimulus guttatus mgf020623m I 0.716
Gorai.004G220800 Gossypium raimondii Gorai.004G220800 I 0.715
PGSC0003DMG400010750 Solanum tuberosum PGSC0003DMG400010750 I 0.714
Solyc03g093610.1 Solanum lycopersicum Solyc03g093610.1 I 0.714
MDP0000689946 Malus domestica MDP0000689946 I 0.710
MDP0000805422 Malus domestica MDP0000805422 I 0.710
PGSC0003DMG400013255 Solanum tuberosum PGSC0003DMG400013255 I 0.709
Solyc11g011740.1 Solanum lycopersicum Solyc11g011740.1 I 0.709
GLYMA19G34670 Glycine max GLYMA19G34670 I 0.709
AMTR_s00148p00084540 Amborella trichopoda AMTR_s00148p00084540 I 0.708
ERF1 Arabidopsis lyrata scaffold_302806.1 I 0.707
Bra023745 Brassica rapa Bra023745 I 0.707
Bra023746 Brassica rapa Bra023746 I 0.707
Bo1g102210 Brassica oleracea Bo1g102210 I 0.707
Thhalv10022374m.g Eutrema salsugineum Thhalv10022374m.g I 0.707
ERF1B Arabidopsis thaliana AT3G23240 D 0.707
OMERI03G15490 Oryza meridionalis OMERI03G15490 I 0.706
ONIVA01G48030 Oryza nivara ONIVA01G48030 I 0.706
OMERI02G25760 Oryza meridionalis OMERI02G25760 I 0.706
ORGLA02G0226500 Oryza glaberrima ORGLA02G0226500 I 0.706
ORUFI02G27830 Oryza rufipogon ORUFI02G27830 I 0.706
ORUFI03G43580 Oryza rufipogon ORUFI03G43580 I 0.706
OS03G0860100 Oryza sativa OS03G0860100 I 0.706
ORGLA03G0387300 Oryza glaberrima ORGLA03G0387300 I 0.706
PGSC0003DMG400010285 Solanum tuberosum PGSC0003DMG400010285 I 0.706
OPUNC02G24070 Oryza punctata OPUNC02G24070 I 0.706
ONIVA02G28810 Oryza nivara ONIVA02G28810 I 0.706
LPERR02G21460 Leersia perrieri LPERR02G21460 I 0.706
Cagra.8559s0001 Capsella grandiflora Cagra.8559s0001 I 0.706
Traes_2AL_0B28B6DBE Triticum aestivum Traes_2AL_0B28B6DBE I 0.706
Carubv10014553m.g Capsella rubella Carubv10014553m.g I 0.706
BGIOSGA009392 Oryza indica BGIOSGA009392 I 0.706
BGIOSGA005915 Oryza indica BGIOSGA005915 I 0.706
Solyc05g051200.1 Solanum lycopersicum Solyc05g051200.1 I 0.706
OS02G0654700 Oryza sativa OS02G0654700 I 0.706
OGLUM03G41640 Oryza glumaepatula OGLUM03G41640 I 0.706
OGLUM02G26840 Oryza glumaepatula OGLUM02G26840 I 0.706
OBART03G41810 Oryza barthii OBART03G41810 I 0.706
Q8LGR8_SOLLC Solanum lycopersicum Q8LGR8_SOLLC I 0.706
OLONG_002067 Oryza longistaminata OLONG_002067 I 0.706
Solyc09g066360.1 Solanum lycopersicum Solyc09g066360.1 I 0.705
Aquca_005_00139 Aquilegia coerulea Aquca_005_00139 I 0.704
PGSC0003DMG400014594 Solanum tuberosum PGSC0003DMG400014594 I 0.704
Gorai.007G046000 Gossypium raimondii Gorai.007G046000 I 0.703
mgf020878m Mimulus guttatus mgf020878m I 0.703
PK28774.1 Cannabis sativa PK28774.1 I 0.703
GLYMA03G31920 Glycine max GLYMA03G31920 I 0.702
PDK_20s1757341g001 Phoenix dactylifera PDK_20s1757341g001 I 0.702
cassava47034.m1 Manihot esculenta cassava47034.m1 I 0.702
Lus10014655.g Linum usitatissimum Lus10014655.g I 0.700
mgf021081m Mimulus guttatus mgf021081m I 0.700
AMTR_s00021p00185480 Amborella trichopoda AMTR_s00021p00185480 I 0.698
Pm003579 Prunus mume Pm003579 I 0.698
PRUPE_ppa016384mg Prunus persica PRUPE_ppa016384mg I 0.698
Bostr.19424s0319 Boechera stricta Bostr.19424s0319 I 0.697
TCM_029773 Theobroma cacao TCM_029773 I 0.695
30147.m014331 Ricinus communis 30147.m014331 I 0.694
Cla007696 Citrullus lanatus Cla007696 I 0.694
Gorai.001G051300 Gossypium raimondii Gorai.001G051300 I 0.693
Pm010368 Prunus mume Pm010368 I 0.693
gene16619-v1.0-hybrid Fragaria vesca gene16619-v1.0-hybrid I 0.693
ERF2_TOBAC Nicotiana tabacum ERF2_TOBAC D 0.693
POPTR_0003s15030 Populus trichocarpa POPTR_0003s15030 I 0.693
Pm019546 Prunus mume Pm019546 I 0.693
PRUPE_ppa010186mg Prunus persica PRUPE_ppa010186mg I 0.693
PRUPE_ppa012014mg Prunus persica PRUPE_ppa012014mg I 0.693
TCM_014845 Theobroma cacao TCM_014845 I 0.693
Eucgr.A02924 Eucalyptus grandis Eucgr.A02924 I 0.692
LPERR03G35710 Leersia perrieri LPERR03G35710 I 0.692
MDP0000517257 Malus domestica MDP0000517257 I 0.691
Eucgr.E02651 Eucalyptus grandis Eucgr.E02651 I 0.691
Eucgr.E03168 Eucalyptus grandis Eucgr.E03168 I 0.691
29900.m001559 Ricinus communis 29900.m001559 I 0.690
Aquca_005_00143 Aquilegia coerulea Aquca_005_00143 I 0.690
PDK_20s1325661g001 Phoenix dactylifera PDK_20s1325661g001 I 0.690
Ca_00359 Cicer arietinum Ca_00359 I 0.690
VIT_10s0003g00580 Vitis vinifera VIT_10s0003g00580 I 0.690
Solyc05g052050.1 Solanum lycopersicum Solyc05g052050.1 I 0.690
PGSC0003DMG400016006 Solanum tuberosum PGSC0003DMG400016006 I 0.690
VIT_16s0013g00890 Vitis vinifera VIT_16s0013g00890 I 0.689
ORA59 Arabidopsis lyrata fgenesh2_kg.1__587__AT1G06160.1 I 0.688
evm.TU.supercontig_13.250 Carica papaya evm.TU.supercontig_13.250 I 0.688
CM1489.90.nc Lotus japonicus CM1489.90.nc I 0.687
SapurV1A.0012s0890 Salix purpurea SapurV1A.0012s0890 I 0.687
e_gw1.265.11.1 Physcomitrella patens e_gw1.265.11.1 I 0.687
GLYMA13G30720 Glycine max GLYMA13G30720 I 0.687
MTR_2g015040 Medicago truncatula MTR_2g015040 I 0.687
POPTR_0004s05100 Populus trichocarpa POPTR_0004s05100 I 0.687
GLYMA15G08560 Glycine max GLYMA15G08560 I 0.687
Eucgr.H04254 Eucalyptus grandis Eucgr.H04254 I 0.686
Lus10025430.g Linum usitatissimum Lus10025430.g I 0.686
Ciclev10016995m.g Citrus clementina Ciclev10016995m.g I 0.686
orange1.1g031071m.g Citrus sinensis orange1.1g031071m.g I 0.686
Ciclev10005891m.g Citrus clementina Ciclev10005891m.g I 0.685
SapurV1A.0059s0630 Salix purpurea SapurV1A.0059s0630 I 0.685
orange1.1g028566m.g Citrus sinensis orange1.1g028566m.g I 0.685
Cla009822 Citrullus lanatus Cla009822 I 0.685
Cucsa.046660 Cucumis sativus Cucsa.046660 I 0.685
Bo1g017580 Brassica oleracea Bo1g017580 I 0.685
Ciclev10023393m.g Citrus clementina Ciclev10023393m.g I 0.685
cassava1608.valid.m1 Manihot esculenta cassava1608.valid.m1 I 0.685
Lus10006579.g Linum usitatissimum Lus10006579.g I 0.684
PGSC0003DMG400013402 Solanum tuberosum PGSC0003DMG400013402 I 0.683
PGSC0003DMG400014204 Solanum tuberosum PGSC0003DMG400014204 I 0.683
orange1.1g047334m.g Citrus sinensis orange1.1g047334m.g I 0.683
Ciclev10021285m.g Citrus clementina Ciclev10021285m.g I 0.683
Solyc03g005520.1 Solanum lycopersicum Solyc03g005520.1 I 0.683
Bra040158 Brassica rapa Bra040158 I 0.683
Pavir.Ea03031 Panicum virgatum Pavir.Ea03031 I 0.682
OS01G0752500 Oryza sativa OS01G0752500 I 0.682
Cucsa.129320 Cucumis sativus Cucsa.129320 I 0.682
TCM_015902 Theobroma cacao TCM_015902 I 0.682
ORUFI01G34250 Oryza rufipogon ORUFI01G34250 I 0.682
MDP0000880063 Malus domestica MDP0000880063 I 0.682
OPUNC01G30160 Oryza punctata OPUNC01G30160 I 0.682
PGSC0003DMG400010719 Solanum tuberosum PGSC0003DMG400010719 I 0.682
OMERI01G28260 Oryza meridionalis OMERI01G28260 I 0.682
MDP0000789227 Malus domestica MDP0000789227 I 0.682
ONIVA01G35550 Oryza nivara ONIVA01G35550 I 0.682
mgf021215m Mimulus guttatus mgf021215m I 0.682
BGIOSGA004470 Oryza indica BGIOSGA004470 I 0.682
Cla009821 Citrullus lanatus Cla009821 I 0.680
mgf018935m Mimulus guttatus mgf018935m I 0.680
mgf026054m Mimulus guttatus mgf026054m I 0.680
MTR_4g088005 Medicago truncatula MTR_4g088005 I 0.680
Bo4g176080 Brassica oleracea Bo4g176080 I 0.679
Bra021712 Brassica rapa Bra021712 I 0.679
mgf001695m Mimulus guttatus mgf001695m I 0.679
MLOC_77669 Hordeum vulgare MLOC_77669 I 0.679
Thhalv10017149m.g Eutrema salsugineum Thhalv10017149m.g I 0.679
Ciclev10005750m.g Citrus clementina Ciclev10005750m.g I 0.679
orange1.1g026385m.g Citrus sinensis orange1.1g026385m.g I 0.679
MTR_1g070020 Medicago truncatula MTR_1g070020 I 0.679
ERF15 Arabidopsis thaliana AT2G31230 D 0.678
MTR_1g070000 Medicago truncatula MTR_1g070000 I 0.678
Bra032433 Brassica rapa Bra032433 I 0.678
Cagra.6952s0002 Capsella grandiflora Cagra.6952s0002 I 0.678
Bostr.24513s0101 Boechera stricta Bostr.24513s0101 I 0.678
Carubv10025229m.g Capsella rubella Carubv10025229m.g I 0.678
ATERF15 Arabidopsis lyrata fgenesh2_kg.4__1110__AT2G31230.1 I 0.678
MTR_1g070045 Medicago truncatula MTR_1g070045 I 0.678
PGSC0003DMG400026261 Solanum tuberosum PGSC0003DMG400026261 I 0.678
Solyc08g078180.1 Solanum lycopersicum Solyc08g078180.1 I 0.678
Ca_00360 Cicer arietinum Ca_00360 I 0.677
Bra018271 Brassica rapa Bra018271 I 0.677
Bo4g052480 Brassica oleracea Bo4g052480 I 0.677
Pavir.Eb03148 Panicum virgatum Pavir.Eb03148 I 0.677
Gorai.008G213900 Gossypium raimondii Gorai.008G213900 I 0.677