CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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NCLIV_058430
(
Neospora caninum
)
AP2
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00847 (AP2)
IPR001471
NCLIV_058430
T006226_2.00
EuPathDB (2015-Mar-30)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
PFD0985w
M00578_2.00
Plasmodium falciparum
AYACACAY
RTGTGTRT
PBM
Campbell et al.(2010)
PFD0985w_D1
0.761
0.698
For this family, TFs with SR scores >
0.677
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
NCLIV_058430
AP2
3141
3194
SLPTGVYFDASRKLWRCQWRENGRFKTKGFSLNVYKTLKEARRACVVYRCLMGG
Links
Other
AP2
family TFs
Other
Neospora caninum
TFs
7 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
TGME49_115760
Toxoplasma gondii
TGME49_115760
I
0.930
EDO06378.1
Babesia bovis
EDO06378.1
I
0.790
TP04_0175
Theileria parva
TP04_0175
I
0.776
TA07100
Theileria annulata
TA07100
I
0.769
ETH_00013965
Eimeria tenella
ETH_00013965
I
0.765
TGME49_072710
Toxoplasma gondii
TGME49_072710
I
0.683
NCLIV_034610
Neospora caninum
NCLIV_034610
I
0.683