Pm024605 (Prunus mume)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00847 (AP2) IPR001471 Pm024605 T006639_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ERF115
M06657_2.00 		Arabidopsis thaliana
CCGCCGYMRYHDCCR
YGGHDRYKRCGGCGG		 Dap-seq
OMalley et al.(2016)
ERF115_col_a 		0.679 0.816
ERF115
M06658_2.00 		Arabidopsis thaliana
CKCCGCCGYMRYHDY
RHDRYKRCGGCGGMG		 Dap-seq
OMalley et al.(2016)
ERF115_colamp_a 		0.679 0.816
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Pm024605 AP2 50 101

Links

Other AP2 family TFs
Other Prunus mume TFs

45 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
PRUPE_ppa015392mg Prunus persica PRUPE_ppa015392mg I 0.737
Eucgr.G01970 Eucalyptus grandis Eucgr.G01970 I 0.697
Ciclev10032575m.g Citrus clementina Ciclev10032575m.g I 0.692
Lus10022426.g Linum usitatissimum Lus10022426.g I 0.692
orange1.1g036963m.g Citrus sinensis orange1.1g036963m.g I 0.692
30147.m014403 Ricinus communis 30147.m014403 I 0.692
evm.TU.supercontig_13.175 Carica papaya evm.TU.supercontig_13.175 I 0.690
Solyc12g042210.1 Solanum lycopersicum Solyc12g042210.1 I 0.689
Cucsa.156890 Cucumis sativus Cucsa.156890 I 0.689
Cla019618 Citrullus lanatus Cla019618 I 0.689
Ciclev10003903m.g Citrus clementina Ciclev10003903m.g I 0.687
orange1.1g005229m.g Citrus sinensis orange1.1g005229m.g I 0.687
chr4.CM0175.50.nd Lotus japonicus chr4.CM0175.50.nd I 0.685
cassava10717.m1 Manihot esculenta cassava10717.m1 I 0.685
TCM_017352 Theobroma cacao TCM_017352 I 0.684
GLYMA19G27790 Glycine max GLYMA19G27790 I 0.684
Cucsa.349200 Cucumis sativus Cucsa.349200 I 0.684
GLYMA16G05190 Glycine max GLYMA16G05190 I 0.684
Cla007205 Citrullus lanatus Cla007205 I 0.684
VIT_14s0068g01040 Vitis vinifera VIT_14s0068g01040 I 0.683
Aquca_043_00039 Aquilegia coerulea Aquca_043_00039 I 0.682
fgenesh2_kg.6__690__AT5G07310.1 Arabidopsis lyrata fgenesh2_kg.6__690__AT5G07310.1 I 0.682
Bostr.13129s0235 Boechera stricta Bostr.13129s0235 I 0.682
Cagra.2662s0009 Capsella grandiflora Cagra.2662s0009 I 0.682
Carubv10002723m.g Capsella rubella Carubv10002723m.g I 0.682
GLYMA02G07310 Glycine max GLYMA02G07310 I 0.682
Bra028703 Brassica rapa Bra028703 I 0.682
Bra009272 Brassica rapa Bra009272 I 0.682
Thhalv10015583m.g Eutrema salsugineum Thhalv10015583m.g I 0.682
GLYMA16G26320 Glycine max GLYMA16G26320 I 0.682
Bo9g175390 Brassica oleracea Bo9g175390 I 0.682
chr1.CM1880.220.nd Lotus japonicus chr1.CM1880.220.nd I 0.681
cassava45576.m1 Manihot esculenta cassava45576.m1 I 0.681
30131.m006971 Ricinus communis 30131.m006971 I 0.681
Bra005932 Brassica rapa Bra005932 I 0.680
TCM_014762 Theobroma cacao TCM_014762 I 0.679
chr1.CM0094.670.nd Lotus japonicus chr1.CM0094.670.nd I 0.679
POPTR_0012s11030 Populus trichocarpa POPTR_0012s11030 I 0.679
GLYMA06G17180 Glycine max GLYMA06G17180 I 0.679
SapurV1A.0517s0130 Salix purpurea SapurV1A.0517s0130 I 0.679
Bo2g008570 Brassica oleracea Bo2g008570 I 0.679
gene06407-v1.0-hybrid Fragaria vesca gene06407-v1.0-hybrid I 0.679
cassava19959.m1 Manihot esculenta cassava19959.m1 I 0.679
ERF115 Arabidopsis thaliana AT5G07310 D 0.679
Bo3g004290 Brassica oleracea Bo3g004290 I 0.678