CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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fgenesh1_pg.scaffold_179000036
(
Physcomitrella patens
)
AP2
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00847 (AP2)
IPR001471
fgenesh1_pg.scaffold_179000036
T007230_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
fgenesh1_pg.scaffold_179000036
AP2
122
169
TNFRGVRHRPELNKWVTEIRPTSQKRKIWLGTYETPEEAARAYDVGIF
Links
Other
AP2
family TFs
Other
Physcomitrella patens
TFs
3 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
estExt_fgenesh1_pg.C_170192
Physcomitrella patens
estExt_fgenesh1_pg.C_170192
N
0.797
estExt_fgenesh1_pg.C_1740049
Physcomitrella patens
estExt_fgenesh1_pg.C_1740049
N
0.760
estExt_fgenesh1_pg.C_3730012
Physcomitrella patens
estExt_fgenesh1_pg.C_3730012
N
0.690