CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
Ciclev10024448m.g
(
Citrus clementina
)
AP2
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00847 (AP2)
IPR001471
Ciclev10024448m.g
T008048_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Ciclev10024448m
AP2
67
120
RSFRGVRRRPWGKFGAEIRDGKDNNGERVWLGTFYTPEDAALAYDRAAFRLHGK
Links
Other
AP2
family TFs
Other
Citrus clementina
TFs
10 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
orange1.1g041658m.g
Citrus sinensis
orange1.1g041658m.g
N
0.899
LPERR06G03670
Leersia perrieri
LPERR06G03670
N
0.734
OPUNC06G03800
Oryza punctata
OPUNC06G03800
N
0.720
GLYMA09G05840
Glycine max
GLYMA09G05840
N
0.695
GLYMA15G17090
Glycine max
GLYMA15G17090
N
0.694
GLYMA15G17100
Glycine max
GLYMA15G17100
N
0.689
Gorai.006G250000
Gossypium raimondii
Gorai.006G250000
N
0.689
Gorai.006G250100
Gossypium raimondii
Gorai.006G250100
N
0.689
MTR_2g438180
Medicago truncatula
MTR_2g438180
N
0.685
Gorai.006G249900
Gossypium raimondii
Gorai.006G249900
N
0.682