CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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gene30159-v1.0-hybrid
(
Fragaria vesca
)
AP2
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00847 (AP2)
IPR001471
gene30159-v1.0-hybrid
T008447_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
mrna30159.1-v1.0-hybrid
AP2
106
157
PTYRGVRRRSNGKWVSEIREPKKPNRIWLGTFLTPEMAAVAYDVAALALKGQ
Links
Other
AP2
family TFs
Other
Fragaria vesca
TFs
14 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Aquca_027_00393
Aquilegia coerulea
Aquca_027_00393
N
0.715
MDP0000833641
Malus domestica
MDP0000833641
N
0.711
MDP0000195376
Malus domestica
MDP0000195376
N
0.709
GLYMA03G34970
Glycine max
GLYMA03G34970
N
0.702
GLYMA15G02900
Glycine max
GLYMA15G02900
N
0.702
GLYMA19G37670
Glycine max
GLYMA19G37670
N
0.702
HRD
Vitis vinifera
VIT_08s0007g03810
N
0.700
Lus10014376.g
Linum usitatissimum
Lus10014376.g
N
0.699
Lus10023873.g
Linum usitatissimum
Lus10023873.g
N
0.699
29092.m000462
Ricinus communis
29092.m000462
N
0.696
LjSGA_035548.1
Lotus japonicus
LjSGA_035548.1
N
0.688
SapurV1A.0154s0220
Salix purpurea
SapurV1A.0154s0220
N
0.682
POPTR_0006s02180
Populus trichocarpa
POPTR_0006s02180
N
0.679
POPTR_0016s02010
Populus trichocarpa
POPTR_0016s02010
N
0.679