CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Gorai.011G113300
(
Gossypium raimondii
)
AP2
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00847 (AP2)
IPR001471
Gorai.011G113300
T008687_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Gorai.011G113300.1
AP2
37
88
SPFRGVRKRRWGRYVSEIRLPGQKTRIWLGSFGSPEMAARAYDSAAFFLKGD
Links
Other
AP2
family TFs
Other
Gossypium raimondii
TFs
11 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Ciclev10022438m.g
Citrus clementina
Ciclev10022438m.g
N
0.740
orange1.1g029817m.g
Citrus sinensis
orange1.1g029817m.g
N
0.740
VIT_18s0089g01030
Vitis vinifera
VIT_18s0089g01030
N
0.739
GLYMA09G36840
Glycine max
GLYMA09G36840
N
0.724
evm.TU.contig_30133
Carica papaya
evm.TU.contig_30133
N
0.717
LjT28A08.90.nc
Lotus japonicus
LjT28A08.90.nc
N
0.698
POPTR_0019s09530
Populus trichocarpa
POPTR_0019s09530
N
0.697
POPTR_0409s00200
Populus trichocarpa
POPTR_0409s00200
N
0.697
SapurV1A.2694s0020
Salix purpurea
SapurV1A.2694s0020
N
0.695
Cucsa.237800
Cucumis sativus
Cucsa.237800
N
0.691
MTR_4g035430
Medicago truncatula
MTR_4g035430
N
0.683