CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Pavir.Ba01283
(
Panicum virgatum
)
AP2
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00847 (AP2)
IPR001471
Pavir.Ba01283
T009361_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Pavir.Ba01283.1.p
AP2
40
93
PVFRGVRRRGQAGRWVCELRVPGRRGSRLWLGTFATPELAARAHDAAAIALSGR
Links
Other
AP2
family TFs
Other
Panicum virgatum
TFs
4 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Pavir.J19655
Panicum virgatum
Pavir.J19655
N
0.832
F775_00827
Aegilops tauschii
F775_00827
I
0.683
Traes_5BL_027509D0D
Triticum aestivum
Traes_5BL_027509D0D
N
0.677
Traes_5BL_6647931E2
Triticum aestivum
Traes_5BL_6647931E2
N
0.677