Pavir.Ba02999 (Panicum virgatum)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00847 (AP2) IPR001471 Pavir.Ba02999 T009366_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Pavir.Ba02999.1.p AP2 72 123
Pavir.Ba02999.2.p AP2 72 123

Links

Other AP2 family TFs
Other Panicum virgatum TFs

43 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Si030741m.g Setaria italica Si030741m.g N 0.788
Sb02g020910 Sorghum bicolor Sb02g020910 N 0.788
Bo3g143350 Brassica oleracea Bo3g143350 I 0.723
Bra010880 Brassica rapa Bra010880 I 0.723
Bra021594 Brassica rapa Bra021594 I 0.719
Bo1g129710 Brassica oleracea Bo1g129710 I 0.714
ONIVA04G27460 Oryza nivara ONIVA04G27460 I 0.713
ORUFI04G30650 Oryza rufipogon ORUFI04G30650 I 0.713
BGIOSGA014134 Oryza indica BGIOSGA014134 I 0.713
OMERI04G24480 Oryza meridionalis OMERI04G24480 I 0.713
OS04G0669200 Oryza sativa OS04G0669200 I 0.713
OGLUM04G28860 Oryza glumaepatula OGLUM04G28860 I 0.713
Bo7g048170 Brassica oleracea Bo7g048170 I 0.713
Bra030095 Brassica rapa Bra030095 I 0.713
Si023330m.g Setaria italica Si023330m.g I 0.709
Pavir.Gb00092 Panicum virgatum Pavir.Gb00092 I 0.709
Pavir.Ga00187 Panicum virgatum Pavir.Ga00187 I 0.709
Pavir.Gb00545 Panicum virgatum Pavir.Gb00545 I 0.703
Gorai.007G312200 Gossypium raimondii Gorai.007G312200 I 0.693
BRADI5G25570 Brachypodium distachyon BRADI5G25570 I 0.691
Bo3g074840 Brassica oleracea Bo3g074840 I 0.684
Bra001784 Brassica rapa Bra001784 I 0.684
GLYMA07G23225 Glycine max GLYMA07G23225 I 0.683
Gorai.004G032500 Gossypium raimondii Gorai.004G032500 I 0.681
GRMZM2G438202 Zea mays GRMZM2G438202 I 0.681
Ca_22534 Cicer arietinum Ca_22534 I 0.681
Pavir.Ga00485 Panicum virgatum Pavir.Ga00485 I 0.681
GRMZM2G068967 Zea mays GRMZM2G068967 I 0.681
Sb06g028090 Sorghum bicolor Sb06g028090 I 0.681
Si010228m.g Setaria italica Si010228m.g I 0.681
SapurV1A.1325s0040 Salix purpurea SapurV1A.1325s0040 I 0.680
POPTR_0011s11620 Populus trichocarpa POPTR_0011s11620 I 0.680
POPTR_0001s40770 Populus trichocarpa POPTR_0001s40770 I 0.680
cassava37846.valid.m1 Manihot esculenta cassava37846.valid.m1 I 0.680
Ciclev10009484m.g Citrus clementina Ciclev10009484m.g I 0.679
GLYMA12G26836 Glycine max GLYMA12G26836 I 0.679
TCM_031608 Theobroma cacao TCM_031608 I 0.679
27904.m000217 Ricinus communis 27904.m000217 I 0.679
orange1.1g028454m.g Citrus sinensis orange1.1g028454m.g I 0.679
evm.TU.supercontig_131.83 Carica papaya evm.TU.supercontig_131.83 I 0.679
Gorai.009G375700 Gossypium raimondii Gorai.009G375700 I 0.679
BRADI5G21250 Brachypodium distachyon BRADI5G21250 I 0.678