Pavir.Cb02104 (Panicum virgatum)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00847 (AP2) IPR001471 Pavir.Cb02104 T009398_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Pavir.Cb02104.1.p AP2 93 153
Pavir.Cb02104.1.p AP2 197 250

Links

Other AP2 family TFs
Other Panicum virgatum TFs

21 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Pavir.Ca00106 Panicum virgatum Pavir.Ca00106 N 0.887
Si010747m.g Setaria italica Si010747m.g N 0.880
Si026706m.g Setaria italica Si026706m.g N 0.880
GRMZM2G022359 Zea mays GRMZM2G022359 N 0.874
Sb07g004580 Sorghum bicolor Sb07g004580 N 0.869
BRADI3G15880 Brachypodium distachyon BRADI3G15880 N 0.847
OB08G14470 Oryza brachyantha OB08G14470 N 0.846
ORGLA08G0037300 Oryza glaberrima ORGLA08G0037300 N 0.846
Traes_7DL_AF3F7B5B2 Triticum aestivum Traes_7DL_AF3F7B5B2 N 0.843
MLOC_71599 Hordeum vulgare MLOC_71599 N 0.836
BGIOSGA027579 Oryza indica BGIOSGA027579 N 0.749
OBART08G04290 Oryza barthii OBART08G04290 N 0.749
ONIVA08G04140 Oryza nivara ONIVA08G04140 N 0.749
LPERR08G04150 Leersia perrieri LPERR08G04150 N 0.746
OGLUM08G04530 Oryza glumaepatula OGLUM08G04530 N 0.746
OMERI08G04370 Oryza meridionalis OMERI08G04370 N 0.746
OPUNC08G04240 Oryza punctata OPUNC08G04240 N 0.746
ORUFI08G04760 Oryza rufipogon ORUFI08G04760 N 0.746
F775_29092 Aegilops tauschii F775_29092 N 0.744
TRIUR3_34177 Triticum urartu TRIUR3_34177 N 0.744
Sb04g027940 Sorghum bicolor Sb04g027940 N 0.679