CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
Pm027717
(
Prunus mume
)
AP2,B3
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00847 (AP2)
PF02362 (B3)
IPR001471
IPR003340
Pm027717
T010549_2.00
GigaDB (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Pm027717
AP2
42
91
KKFKGVVEQPNGHWGAQIYANHERVWLGTFNSEIDAAMGYDSAALKLRGR
Pm027717
B3
171
277
FQKELTPSDVGKLNRLVIPSKYACTYFPTVSEAIRGKVESCSSQLTFYDRMMRSWTFRFCFWKSSKSFVFTKGWSRFVRTHDLQAKDTIRFLQCRYKQSGDGNYKEQ
Links
Other
AP2,B3
family TFs
Other
Prunus mume
TFs
4 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
PRUPE_ppa021899mg
Prunus persica
PRUPE_ppa021899mg
N
0.986
MDP0000165802
Malus domestica
MDP0000165802
N
0.799
MDP0000534780
Malus domestica
MDP0000534780
N
0.777
MDP0000526584
Malus domestica
MDP0000526584
N
0.736