CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Bostr.9345s0049
(
Boechera stricta
)
AP-2
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF03299 (TF_AP-2)
IPR013854
Bostr.9345s0049
T011223_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Bostr.9345s0049.1.p
AP-2
108
235
GHVMLKKLRDALETVRGRMDGRNREEVEKAISMVEALAVKLTQNEGELIQDKFEVKKLASFLKKASEDAKKMVNQEKSFACAEIDSARALVMSLGGIFEEQELCAKTSRDQGPNVEKLVEEVQEARRI
Bostr.9345s0049.2.p
AP-2
108
235
GHVMLKKLRDALETVRGRMDGRNREEVEKAISMVEALAVKLTQNEGELIQDKFEVKKLASFLKKASEDAKKMVNQEKSFACAEIDSARALVMSLGGIFEEQELCAKTSRDQGPNVEKLVEEVQEARRI
Links
Other
AP-2
family TFs
Other
Boechera stricta
TFs
7 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Cagra.1642s0049
Capsella grandiflora
Cagra.1642s0049
N
0.790
Carubv10022982m.g
Capsella rubella
Carubv10022982m.g
N
0.790
AT2G40820
Arabidopsis thaliana
AT2G40820
N
0.760
TCM_023871
Theobroma cacao
TCM_023871
N
0.721
POPTR_0016s03290
Populus trichocarpa
POPTR_0016s03290
N
0.713
Bo4g190510
Brassica oleracea
Bo4g190510
N
0.711