CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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gene29917-v1.0-hybrid
(
Fragaria vesca
)
AP-2
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF03299 (TF_AP-2)
IPR013854
gene29917-v1.0-hybrid
T011231_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
mrna29917.1-v1.0-hybrid
AP-2
106
228
GHVLLKKLRDALEYLRGLLAGRNKEDVEEAISMVEALAVKLTQKEGELIQDKFEVKKLASYLKQTSEDAKKLVNQEKSFACAEIESARGIVKRIGEALEERNRTTEDPKRQDVEELVEVVQEA
Links
Other
AP-2
family TFs
Other
Fragaria vesca
TFs
3 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
SapurV1A.0189s0010
Salix purpurea
SapurV1A.0189s0010
N
0.784
SapurV1A.1916s0060
Salix purpurea
SapurV1A.1916s0060
N
0.784
POPTR_0016s03290
Populus trichocarpa
POPTR_0016s03290
N
0.712