CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Minc11280
(
Meloidogyne incognita
)
AP-2
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF03299 (TF_AP-2)
IPR013854
Minc11280
T011268_2.00
Superfamily (2010-Oct-26)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Minc11280
AP-2
67
275
ETYCTVPGRLTLLSNLKKYRVTIAEVQRRLSPPECLNASVLGGILRKAKNKDGGKILREQLMSYGVELTSGRRRQVQLTCFSSLVEEEVAQIASDFNLVNSKHYPLKEVAKYVLGDIEVHNAQDASMYRRMGLFYASALLQRILDLHRADRTPLADSFLKFDPRTPHLDEKLQHELSNYTLLTHGFGGRMFIEVLETVLSVIVEADKIL
Links
Other
AP-2
family TFs
Other
Meloidogyne incognita
TFs
10 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
snap_masked-nMf.1.1.scaf31395-processed-gene-0.2
Meloidogyne floridensis
snap_masked-nMf.1.1.scaf31395-processed-gene-0.2
I
1.000
genemark-nMf.1.1.scaf15285-processed-gene-0.1
Meloidogyne floridensis
genemark-nMf.1.1.scaf15285-processed-gene-0.1
N
0.979
ANCCEY_07283
Ancylostoma ceylanicum
ANCCEY_07283
I
0.773
ENSSARG00000001996
Sorex araneus
ENSSARG00000001996
I
0.773
ENSGACG00000002672
Gasterosteus aculeatus
ENSGACG00000002672
I
0.750
tfap2b
Danio rerio
ENSDARG00000012667
I
0.750
ENSGMOG00000009513
Gadus morhua
ENSGMOG00000009513
I
0.750
GPLIN_001548200
Globodera pallida
GPLIN_001548200
I
0.719
TFAP2D
Microcebus murinus
ENSMICG00000005507
I
0.714
SPER_0000909201
Spirometra erinaceieuropaei
SPER_0000909201
I
0.702