CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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maker-nMf.1.1.scaf01027-snap-gene-0.8
(
Meloidogyne floridensis
)
AP-2
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF03299 (TF_AP-2)
IPR013854
maker-nMf.1.1.scaf01027-snap-gene-0.8
T011458_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
maker-nMf.1.1.scaf01027-snap-gene-0.8-mRNA-1
AP-2
452
494
ETFCTVPGRLSLLSSTPKYRVTVGEIHRRINPPECLNASVLGG
maker-nMf.1.1.scaf01027-snap-gene-0.8-mRNA-1
AP-2
493
664
GGRLSLLSSTPKYRVTVGEIHRRINPPECLNASVLGGILRRAKSKDGGKSLRDQLKIYGLVLPAGRRKTANVSTLTALVEYEAYNLAKDFHSLCENEFPAKQIADYMSFKSQSSEIQRKKQMLAISRQTLSELMELLRQDRSPVCQGTACRPVLEHSIQQHLTHFSMVGLHF
Links
Other
AP-2
family TFs
Other
Meloidogyne floridensis
TFs
2 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Minc15669
Meloidogyne incognita
Minc15669
N
0.783
MhA1_Contig53.frz3.gene56
Meloidogyne hapla
MhA1_Contig53.frz3.gene56
N
0.736