CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Phyra78843
(
Phytophthora ramorum
)
ARID/BRIGHT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF01388 (ARID)
IPR001606
Phyra78843
T015449_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Phyra78843
ARID/BRIGHT
43
133
AEGQFVEALRLFLYQRGQPMKELPRADGQLVNLRLLYKTVVSLDGFEAVCANGRWEQVVRRVGRTKAASEPSEELCSTYKAHYEATLLAYE
Links
Other
ARID/BRIGHT
family TFs
Other
Phytophthora ramorum
TFs
8 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
fgenesh_scip_prom.28083.156
Phytophthora lateralis
fgenesh_scip_prom.28083.156
N
0.695
estExt_Genewise1Plus.C_40175
Phytophthora capsici
estExt_Genewise1Plus.C_40175
N
0.630
Physo133567
Phytophthora sojae
Physo133567
N
0.619
PITG_11272
Phytophthora infestans
PITG_11272
N
0.617
F443_18100
Phytophthora parasitica
F443_18100
N
0.617
HpaG801530
Hyaloperonospora arabidopsidis
HpaG801530
N
0.584
maker-pve_contig_107-fgenesh-gene-0.4
Pythium vexans
maker-pve_contig_107-fgenesh-gene-0.4
N
0.471
maker-pir_contig_464-snap-gene-0.9
Pythium irregulare
maker-pir_contig_464-snap-gene-0.9
N
0.439