CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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e_gw1.4.238.1
(
Coccomyxa subellipsoidea C169
)
ARID/BRIGHT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF01388 (ARID)
IPR001606
e_gw1.4.238.1
T016085_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
13471
ARID/BRIGHT
76
155
ASESFNRGFQAWLRSQGKAAKRNPVVAGHEVDLAKLYRLVSGRGGFERVSDDKLWRDVARIMQDADKIRVPANIYELNCE
Links
Other
ARID/BRIGHT
family TFs
Other
Coccomyxa subellipsoidea C169
TFs
14 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
GK21672
Drosophila willistoni
FBgn0223657
N
0.512
SapurV1A.0216s0430
Salix purpurea
SapurV1A.0216s0430
N
0.479
SapurV1A.2929s0030
Salix purpurea
SapurV1A.2929s0030
N
0.479
PYU1_G003210
Pythium ultimum
PYU1_G003210
N
0.473
maker-nMf.1.1.scaf01260-augustus-gene-0.7
Meloidogyne floridensis
maker-nMf.1.1.scaf01260-augustus-gene-0.7
N
0.465
TC007519
Tribolium castaneum
TC007519
N
0.458
OFLC_0000209301
Onchocerca flexuosa
OFLC_0000209301
N
0.450
CFIO01_08658
Colletotrichum fioriniae
CFIO01_08658
N
0.446
GK25519
Drosophila willistoni
FBgn0227478
N
0.444
Lus10008531.g
Linum usitatissimum
Lus10008531.g
N
0.440
PAAG_01318
Paracoccidioides sp lutzii
PAAG_01318
N
0.438
BOTBODRAFT_44712
Botryobasidium botryosum
BOTBODRAFT_44712
N
0.436
Solyc04g025930.1
Solanum lycopersicum
Solyc04g025930.1
N
0.430
gw1.8.90.1
Volvox carteri
gw1.8.90.1
N
0.425