CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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fgenesh1_pg.C_Chr_01.0001000258
(
Ostreococcus tauri
)
ARID/BRIGHT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF01388 (ARID)
IPR001606
fgenesh1_pg.C_Chr_01.0001000258
T016289_2.00
Superfamily (2010-Oct-26)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
fgenesh1_pg.C_Chr_01.0001000258
ARID/BRIGHT
1171
1253
KEFDDLRAKIFGIDPPRAPIFCGVPMNLHRVFIESMHLGGYEHVTRRKLWKTVARTLGRDLTSQTSASFAMRKAYERCLYPME
Links
Other
ARID/BRIGHT
family TFs
Other
Ostreococcus tauri
TFs
6 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
fgenesh1_pm.chr_1_#_240
Ostreococcus RCC809
fgenesh1_pm.chr_1_#_240
N
0.676
OSTLU_29004
Ostreococcus lucimarinus
OSTLU_29004
N
0.638
AZW_est_orfs.1_230_4278492:2
Micromonas pusilla
AZW_est_orfs.1_230_4278492:2
N
0.514
EuGene.0800010038
Micromonas sp RCC299
EuGene.0800010038
N
0.499
EuGene.0000140409
Micromonas pusilla
EuGene.0000140409
N
0.429
Aqu1.213820
Amphimedon queenslandica
Aqu1.213820
I
0.424