CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Bra015374
(
Brassica rapa
)
B3
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02362 (B3)
IPR003340
Bra015374
T018829_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Bra015374.1-P
B3
42
130
FSKVLTASDTSTHGGFSVLRKHATECLSPLDMTQQTPTQELVAEDVHAYQWKFKHIFRGWSTFVTAKRLVARDTFVFLRTSQFIISLNK
Links
Other
B3
family TFs
Other
Brassica rapa
TFs
37 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ARF9
Arabidopsis lyrata
Al_scaffold_0007_1752
I
0.800
Bo1g037360
Brassica oleracea
Bo1g037360
I
0.776
Bra013748
Brassica rapa
Bra013748
I
0.765
Cucsa.114840
Cucumis sativus
Cucsa.114840
I
0.729
Ciclev10019131m.g
Citrus clementina
Ciclev10019131m.g
I
0.729
orange1.1g005491m.g
Citrus sinensis
orange1.1g005491m.g
I
0.729
GLYMA03G17450
Glycine max
GLYMA03G17450
I
0.718
MTR_7g062540
Medicago truncatula
MTR_7g062540
I
0.718
POPTR_0001s10900
Populus trichocarpa
POPTR_0001s10900
I
0.718
Ca_23296
Cicer arietinum
Ca_23296
I
0.718
Cla013021
Citrullus lanatus
Cla013021
I
0.718
30068.m002516
Ricinus communis
30068.m002516
I
0.718
SapurV1A.0035s0230
Salix purpurea
SapurV1A.0035s0230
I
0.718
PK02218.1
Cannabis sativa
PK02218.1
I
0.718
LjSGA_059323.1
Lotus japonicus
LjSGA_059323.1
I
0.718
ARF11
Arabidopsis thaliana
AT2G46530
I
0.706
Bo3g039330
Brassica oleracea
Bo3g039330
I
0.706
Bo4g008150
Brassica oleracea
Bo4g008150
I
0.706
Bra004530
Brassica rapa
Bra004530
I
0.706
MTR_4g021580
Medicago truncatula
MTR_4g021580
I
0.706
TCM_016500
Theobroma cacao
TCM_016500
I
0.706
cassava42787.valid.m1
Manihot esculenta
cassava42787.valid.m1
I
0.706
cassava42788.valid.m1
Manihot esculenta
cassava42788.valid.m1
I
0.706
cassava42789.valid.m1
Manihot esculenta
cassava42789.valid.m1
I
0.706
cassava45422.m1
Manihot esculenta
cassava45422.m1
I
0.706
cassava45423.m1
Manihot esculenta
cassava45423.m1
I
0.706
cassava45424.m1
Manihot esculenta
cassava45424.m1
I
0.706
cassava45425.m1
Manihot esculenta
cassava45425.m1
I
0.706
cassava45426.m1
Manihot esculenta
cassava45426.m1
I
0.706
Bostr.25993s0113
Boechera stricta
Bostr.25993s0113
I
0.706
Eucgr.D01764
Eucalyptus grandis
Eucgr.D01764
I
0.706
gene25123-v1.0-hybrid
Fragaria vesca
gene25123-v1.0-hybrid
I
0.706
Gorai.003G078000
Gossypium raimondii
Gorai.003G078000
I
0.706
MDP0000139073
Malus domestica
MDP0000139073
I
0.706
PK07332.1
Cannabis sativa
PK07332.1
I
0.706
Bo7g109250
Brassica oleracea
Bo7g109250
I
0.704
Bra019255
Brassica rapa
Bra019255
I
0.704