VDD (Arabidopsis lyrata)
B3

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF02362 (B3) IPR003340 fgenesh1_pg.C_scaffold_6001499 T019175_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
fgenesh1_pg.C_scaffold_6001499 B3 19 114
fgenesh1_pg.C_scaffold_6001499 B3 218 308

Links

Other B3 family TFs
Other Arabidopsis lyrata TFs

5 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
VDD Arabidopsis thaliana AT5G18000 N 0.870
Bostr.26527s0412 Boechera stricta Bostr.26527s0412 N 0.849
Carubv10002417m.g Capsella rubella Carubv10002417m.g N 0.843
Cagra.6254s0043 Capsella grandiflora Cagra.6254s0043 N 0.843
Thhalv10015705m.g Eutrema salsugineum Thhalv10015705m.g N 0.724