CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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OBART08G10540
(
Oryza barthii
)
B3
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02362 (B3)
IPR003340
OBART08G10540
T020021_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
OBART08G10540.1
B3
54
144
HFLLTMMGDFQHEMIIPKEFVQRLKGDIPGEIQLETRNRNSHTVRVDKTQEKVIFTEGWAQFVKTFDLQMGDSMMFRFNGNSQFDVIIVDQ
OBART08G10540.1
B3
320
414
FVSVIGKNNASGRISSLSIANRYVDNYLQDEKTICLSRLGDKWNIRLSDSSGNRRMVGGCRKFAEDNDVGVGDICLFELLKNHKCTMKVHIIRAK
OBART08G10540.2
B3
54
144
HFLLTMMGDFQHEMIIPKEFVQRLKGDIPGEIQLETRNRNSHTVRVDKTQEKVIFTEGWAQFVKTFDLQMGDSMMFRFNGNSQFDVIIVDQ
OBART08G10540.2
B3
338
432
FVSVIGKNNASGRISSLSIANRYVDNYLQDEKTICLSRLGDKWNIRLSDSSGNRRMVGGCRKFAEDNDVGVGDICLFELLKNHKCTMKVHIIRAK
OBART08G10540.3
B3
25
115
HFLLTMMGDFQHEMIIPKEFVQRLKGDIPGEIQLETRNRNSHTVRVDKTQEKVIFTEGWAQFVKTFDLQMGDSMMFRFNGNSQFDVIIVDQ
OBART08G10540.3
B3
291
385
FVSVIGKNNASGRISSLSIANRYVDNYLQDEKTICLSRLGDKWNIRLSDSSGNRRMVGGCRKFAEDNDVGVGDICLFELLKNHKCTMKVHIIRAK
OBART08G10540.4
B3
25
115
HFLLTMMGDFQHEMIIPKEFVQRLKGDIPGEIQLETRNRNSHTVRVDKTQEKVIFTEGWAQFVKTFDLQMGDSMMFRFNGNSQFDVIIVDQ
OBART08G10540.4
B3
309
403
FVSVIGKNNASGRISSLSIANRYVDNYLQDEKTICLSRLGDKWNIRLSDSSGNRRMVGGCRKFAEDNDVGVGDICLFELLKNHKCTMKVHIIRAK
Links
Other
B3
family TFs
Other
Oryza barthii
TFs
7 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ONIVA08G05080
Oryza nivara
ONIVA08G05080
N
0.957
ORUFI08G11760
Oryza rufipogon
ORUFI08G11760
N
0.957
BGIOSGA027192
Oryza indica
BGIOSGA027192
N
0.951
OLONG_014837
Oryza longistaminata
OLONG_014837
N
0.935
ONIVA08G11320
Oryza nivara
ONIVA08G11320
N
0.707
BGIOSGA027187
Oryza indica
BGIOSGA027187
N
0.702