CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
OMERI03G07870
(
Oryza meridionalis
)
B3
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02362 (B3)
IPR003340
OMERI03G07870
T020225_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
OMERI03G07870.1
B3
285
380
FFRIILPGSSKTKLKLPYKFARELGDRELREARLRVAGEGRRPWDVKVFDDDVSGDVYLGRGWQEFARAHDLRDGHFLVFRYDGAAAFTVTVFDET
OMERI03G07870.1
B3
430
516
QCNLEDKQAQYLNVPMEFQEAHEYAKREKVVLRMRGEAWTVRLKHSRRERGQRTAFRYGWHRFCVDNGLAIGDTCFFRVLREGDLRR
OMERI03G07870.2
B3
15
110
FFRIILPGSSKTKLKLPYKFARELGDRELREARLRVAGEGRRPWDVKVFDDDVSGDVYLGRGWQEFARAHDLRDGHFLVFRYDGAAAFTVTVFDET
OMERI03G07870.2
B3
159
246
RQCNLEDKQAQYLNVPMEFQEAHEYAKREKVVLRMRGEAWTVRLKHSRRERGQRTAFRYGWHRFCVDNGLAIGDTCFFRVLREGDLRR
OMERI03G07870.5
B3
246
341
FFRIILPGSSKTKLKLPYKFARELGDRELREARLRVAGEGRRPWDVKVFDDDVSGDVYLGRGWQEFARAHDLRDGHFLVFRYDGAAAFTVTVFDET
OMERI03G07870.5
B3
391
477
QCNLEDKQAQYLNVPMEFQEAHEYAKREKVVLRMRGEAWTVRLKHSRRERGQRTAFRYGWHRFCVDNGLAIGDTCFFRVLREGDLRR
OMERI03G07870.6
B3
15
110
FFRIILPGSSKTKLKLPYKFARELGDRELREARLRVAGEGRRPWDVKVFDDDVSGDVYLGRGWQEFARAHDLRDGHFLVFRYDGAAAFTVTVFDET
OMERI03G07870.6
B3
159
246
RQCNLEDKQAQYLNVPMEFQEAHEYAKREKVVLRMRGEAWTVRLKHSRRERGQRTAFRYGWHRFCVDNGLAIGDTCFFRVLREGDLRR
Links
Other
B3
family TFs
Other
Oryza meridionalis
TFs
9 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
OGLUM03G08230
Oryza glumaepatula
OGLUM03G08230
N
0.978
ORGLA03G0078800
Oryza glaberrima
ORGLA03G0078800
N
0.978
ORUFI03G08170
Oryza rufipogon
ORUFI03G08170
N
0.978
OS03G0212300
Oryza sativa
OS03G0212300
N
0.978
BGIOSGA012100
Oryza indica
BGIOSGA012100
N
0.973
ONIVA03G08950
Oryza nivara
ONIVA03G08950
N
0.973
OPUNC03G07840
Oryza punctata
OPUNC03G07840
N
0.923
OBART03G08090
Oryza barthii
OBART03G08090
N
0.852