CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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OMERI06G21770
(
Oryza meridionalis
)
B3
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02362 (B3)
IPR003340
OMERI06G21770
T020252_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
OMERI06G21770.1
B3
94
195
SPACLRRLSVPGEFAARLDDDDAAGVGEEERGRRAAAVLVVGPLGKVWRVELRRSPAGDGDGEAWLGGGWPELAAAHGLGEGWGVVLRLERRGVASLRVFDP
OMERI06G21770.1
B3
217
311
FIKLLQQEHLEKMKIPEKFVQQHLTETYTNNHQNAIIVCPLGKFWRVELQQDQPDVLLRDGWAPFLAAHDLSEGNILLFRYEGNMVFTVEVFLQN
OMERI06G21770.1
B3
391
482
FTKEMTAYSIHSLLSVRGTFCSQIGLLEACAITLKTSMKKKGSWRVAFKTANTYGYINGPGWRKFCLENEVKEGDRLTFNSIETTIWHVVIV
Links
Other
B3
family TFs
Other
Oryza meridionalis
TFs
8 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ORGLA06G0180700
Oryza glaberrima
ORGLA06G0180700
N
0.938
OS06G0632500
Oryza sativa
OS06G0632500
N
0.926
OGLUM06G22930
Oryza glumaepatula
OGLUM06G22930
N
0.905
ORUFI06G23440
Oryza rufipogon
ORUFI06G23440
N
0.898
ONIVA06G25740
Oryza nivara
ONIVA06G25740
N
0.855
OPUNC06G19660
Oryza punctata
OPUNC06G19660
N
0.796
OBART06G21860
Oryza barthii
OBART06G21860
N
0.754
LPERR06G18130
Leersia perrieri
LPERR06G18130
N
0.719