CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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POPTR_0003s19110
(
Populus trichocarpa
)
B3
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02362 (B3)
IPR003340
POPTR_0003s19110
T020833_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
POPTR_0003s19110.1
B3
183
298
IKKKMKPSDLGNLCRLLVSADLVEKHILPFLNEDQTKQVIIPNQERNGLKVWVRDIDTESMHQLVFKRWSTSKSYIFNDGWTKHFVKRRNLVEGDEIGLYWDNDQSRFHFSVLSRA
Links
Other
B3
family TFs
Other
Populus trichocarpa
TFs
8 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
SapurV1A.0192s0300
Salix purpurea
SapurV1A.0192s0300
N
0.840
SapurV1A.4928s0010
Salix purpurea
SapurV1A.4928s0010
N
0.840
XM_002303921.1
Populus trichocarpa
POPTR_0003s19090
N
0.838
SapurV1A.1729s0060
Salix purpurea
SapurV1A.1729s0060
N
0.828
SapurV1A.0537s0020
Salix purpurea
SapurV1A.0537s0020
N
0.820
SapurV1A.1729s0080
Salix purpurea
SapurV1A.1729s0080
N
0.818
SapurV1A.7483s0010
Salix purpurea
SapurV1A.7483s0010
N
0.778
POPTR_0004s09870
Populus trichocarpa
POPTR_0004s09870
N
0.710