CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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POPTR_0009s10620
(
Populus trichocarpa
)
B3
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02362 (B3)
IPR003340
POPTR_0009s10620
T020880_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
POPTR_0009s10620.1
B3
112
203
FAKTLVRSNVTVGFWMHLPMRFCKMHLPKNDTTVFLENESGEEYILNYIAERTALSGGWKAFCAANNLHEGDVLVFHLVKPSRFKVYIVKGN
Links
Other
B3
family TFs
Other
Populus trichocarpa
TFs
7 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
POPTR_0004s14900
Populus trichocarpa
POPTR_0004s14900
N
0.989
SapurV1A.0090s0740
Salix purpurea
SapurV1A.0090s0740
N
0.989
SapurV1A.0627s0060
Salix purpurea
SapurV1A.0627s0060
N
0.989
cassava38060.valid.m1
Manihot esculenta
cassava38060.valid.m1
N
0.830
cassava38061.valid.m1
Manihot esculenta
cassava38061.valid.m1
N
0.830
Lus10019873.g
Linum usitatissimum
Lus10019873.g
N
0.804
29801.m003201
Ricinus communis
29801.m003201
N
0.783