CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
scaffold_400548.1
(
Arabidopsis lyrata
)
B3
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02362 (B3)
IPR003340
scaffold_400548.1
T021166_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
scaffold_400548.1
B3
69
156
FFKPLLPGFHSHLTIPVAFFLKNIEGRHEQKTAELRSDASKITWEVKIDGQRLTDGWKEFALSHDLRIGDIVVFRQERDMCFHVTMLG
scaffold_400548.1
B3
196
293
CFVANVTVSSLRDDRLNLPRSFVRENGLDTRCGEIVLMNEKGRTWTLDLKGNKSYRTTYIKQGWRSFCHANGLRAGSIFTFKLIQKGKTPVLRLSPKE
scaffold_400548.1
B3
341
438
CFVAHITRSSLRYDILYLPKRFMRENGLDTRCGEMILMNEKGRSWALDLKRKNSCGTTYIKRGWRSFCRANGLRAGSFYTFKLIQNERTLVLRLVPKE
scaffold_400548.1
B3
493
590
FVTVTLTLYNVSLSRLTLPIPFTKVNGIQNAKKMSFLDKHGVKWSTSLRFEQDRQRMRLVGGWKEFCDANGVKIGESIMLELVLEADKSFVLKFCSKV
Links
Other
B3
family TFs
Other
Arabidopsis lyrata
TFs
2 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
scaffold_400563.1
Arabidopsis lyrata
scaffold_400563.1
N
0.937
AT2G24645
Arabidopsis thaliana
AT2G24645
N
0.703