CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Si021223m.g
(
Setaria italica
)
B3
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02362 (B3)
IPR003340
Si021223m.g
T021304_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Si021223m
B3
133
255
FCKTLTASDTSTHGGFSVPRRAAERVFPPLVISHSSLQHRSLSHGIFMIKTSLSVYAIVSYNQGPLQATKMKTLIWSVRQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAS
Links
Other
B3
family TFs
Other
Setaria italica
TFs
128 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
PGSC0003DMG401018664
Solanum tuberosum
PGSC0003DMG401018664
I
0.840
Pavir.Cb00190
Panicum virgatum
Pavir.Cb00190
I
0.776
MTR_8g079492
Medicago truncatula
MTR_8g079492
I
0.745
Sb06g032500
Sorghum bicolor
Sb06g032500
N
0.742
BGIOSGA014119
Oryza indica
BGIOSGA014119
I
0.737
LPERR04G24670
Leersia perrieri
LPERR04G24670
I
0.737
MTR_2g018690
Medicago truncatula
MTR_2g018690
I
0.737
OB04G36140
Oryza brachyantha
OB04G36140
I
0.737
OBART04G29160
Oryza barthii
OBART04G29160
I
0.737
OGLUM04G29070
Oryza glumaepatula
OGLUM04G29070
I
0.737
OLONG_022882
Oryza longistaminata
OLONG_022882
I
0.737
OMERI04G24630
Oryza meridionalis
OMERI04G24630
I
0.737
ONIVA04G27670
Oryza nivara
ONIVA04G27670
I
0.737
OPUNC04G26690
Oryza punctata
OPUNC04G26690
I
0.737
ORGLA04G0254900
Oryza glaberrima
ORGLA04G0254900
I
0.737
ORUFI04G30870
Oryza rufipogon
ORUFI04G30870
I
0.737
ARF12
Oryza sativa
OS04G0671900
I
0.737
Pavir.Ga00205
Panicum virgatum
Pavir.Ga00205
I
0.735
BRADI5G25767
Brachypodium distachyon
BRADI5G25767
I
0.727
GLYMA13G29320
Glycine max
GLYMA13G29320
I
0.727
GLYMA15G09750
Glycine max
GLYMA15G09750
I
0.727
MTR_5g076270
Medicago truncatula
MTR_5g076270
I
0.727
TCM_001906
Theobroma cacao
TCM_001906
I
0.727
Ca_15694
Cicer arietinum
Ca_15694
I
0.727
Aquca_002_01425
Aquilegia coerulea
Aquca_002_01425
I
0.727
GRMZM2G078274
Zea mays
GRMZM2G078274
I
0.724
VIT_12s0028g01170
Vitis vinifera
VIT_12s0028g01170
I
0.722
AMTR_s00092p00072950
Amborella trichopoda
AMTR_s00092p00072950
I
0.717
GLYMA02G40650
Glycine max
GLYMA02G40650
I
0.717
GLYMA05G27580
Glycine max
GLYMA05G27580
I
0.717
GLYMA08G10550
Glycine max
GLYMA08G10550
I
0.717
GLYMA14G38940
Glycine max
GLYMA14G38940
I
0.717
MLOC_51932
Hordeum vulgare
MLOC_51932
I
0.717
POPTR_0017s01870
Populus trichocarpa
POPTR_0017s01870
I
0.717
PRUPE_ppa001179mg
Prunus persica
PRUPE_ppa001179mg
I
0.717
Si005802m.g
Setaria italica
Si005802m.g
I
0.717
TCM_017488
Theobroma cacao
TCM_017488
I
0.717
TCM_029410
Theobroma cacao
TCM_029410
I
0.717
Traes_2AL_A7941CB12
Triticum aestivum
Traes_2AL_A7941CB12
I
0.717
Traes_2DL_8434C0251
Triticum aestivum
Traes_2DL_8434C0251
I
0.717
ARF6
Vitis vinifera
VIT_10s0003g04100
I
0.717
Ca_00467
Cicer arietinum
Ca_00467
I
0.717
Ca_05025
Cicer arietinum
Ca_05025
I
0.717
Cla019844
Citrullus lanatus
Cla019844
I
0.717
Pm010467
Prunus mume
Pm010467
I
0.717
29599.m000177
Ricinus communis
29599.m000177
I
0.717
29769.m000463
Ricinus communis
29769.m000463
I
0.717
cassava2408.valid.m1
Manihot esculenta
cassava2408.valid.m1
I
0.717
cassava30265.valid.m1
Manihot esculenta
cassava30265.valid.m1
I
0.717
cassava30266.valid.m1
Manihot esculenta
cassava30266.valid.m1
I
0.717
cassava35541.valid.m1
Manihot esculenta
cassava35541.valid.m1
I
0.717
Cucsa.152170
Cucumis sativus
Cucsa.152170
I
0.717
Ciclev10011065m.g
Citrus clementina
Ciclev10011065m.g
I
0.717
gene30394-v1.0-hybrid
Fragaria vesca
gene30394-v1.0-hybrid
I
0.717
gene31631-v1.0-hybrid
Fragaria vesca
gene31631-v1.0-hybrid
I
0.717
Gorai.009G152700
Gossypium raimondii
Gorai.009G152700
I
0.717
Lus10007386.g
Linum usitatissimum
Lus10007386.g
I
0.717
Lus10010969.g
Linum usitatissimum
Lus10010969.g
I
0.717
Lus10031354.g
Linum usitatissimum
Lus10031354.g
I
0.717
MDP0000232417
Malus domestica
MDP0000232417
I
0.717
MDP0000268306
Malus domestica
MDP0000268306
I
0.717
orange1.1g003544m.g
Citrus sinensis
orange1.1g003544m.g
I
0.717
Pavir.Da00065
Panicum virgatum
Pavir.Da00065
I
0.717
SapurV1A.0147s0210
Salix purpurea
SapurV1A.0147s0210
I
0.717
PK26077.1
Cannabis sativa
PK26077.1
I
0.717
GRMZM2G028980
Zea mays
GRMZM2G028980
I
0.714
OB02G14210
Oryza brachyantha
OB02G14210
I
0.714
Si016262m.g
Setaria italica
Si016262m.g
I
0.714
Gorai.001G204500
Gossypium raimondii
Gorai.001G204500
I
0.714
Pavir.Aa03303
Panicum virgatum
Pavir.Aa03303
I
0.714
Pavir.Ab00451
Panicum virgatum
Pavir.Ab00451
I
0.714
PGSC0003DMG400028826
Solanum tuberosum
PGSC0003DMG400028826
I
0.711
ARF17
Oryza indica
BGIOSGA020682
I
0.707
GLYMA02G45100
Glycine max
GLYMA02G45100
I
0.707
GLYMA11G31940
Glycine max
GLYMA11G31940
I
0.707
GLYMA14G03650
Glycine max
GLYMA14G03650
I
0.707
GLYMA18G05330
Glycine max
GLYMA18G05330
I
0.707
GSMUA_Achr11G01610_001
Musa acuminata
GSMUA_Achr11G01610_001
I
0.707
GSMUA_Achr11G25770_001
Musa acuminata
GSMUA_Achr11G25770_001
I
0.707
GSMUA_Achr4G25960_001
Musa acuminata
GSMUA_Achr4G25960_001
I
0.707
GSMUA_Achr5G00590_001
Musa acuminata
GSMUA_Achr5G00590_001
I
0.707
LPERR06G20540
Leersia perrieri
LPERR06G20540
I
0.707
MTR_3g064050
Medicago truncatula
MTR_3g064050
I
0.707
OB06G32420
Oryza brachyantha
OB06G32420
I
0.707
OBART06G24660
Oryza barthii
OBART06G24660
I
0.707
OGLUM06G26000
Oryza glumaepatula
OGLUM06G26000
I
0.707
OLONG_018268
Oryza longistaminata
OLONG_018268
I
0.707
OMERI06G24880
Oryza meridionalis
OMERI06G24880
I
0.707
ONIVA02G35510
Oryza nivara
ONIVA02G35510
I
0.707
OPUNC06G22430
Oryza punctata
OPUNC06G22430
I
0.707
ORUFI06G26570
Oryza rufipogon
ORUFI06G26570
I
0.707
ARF17
Oryza sativa
OS06G0677800
I
0.707
POPTR_0001s36900
Populus trichocarpa
POPTR_0001s36900
I
0.707
POPTR_0002s05590
Populus trichocarpa
POPTR_0002s05590
I
0.707
POPTR_0005s22930
Populus trichocarpa
POPTR_0005s22930
I
0.707
PRUPE_ppa001069mg
Prunus persica
PRUPE_ppa001069mg
I
0.707
Sb04g004430
Sorghum bicolor
Sb04g004430
I
0.707
Solyc02g037530.2
Solanum lycopersicum
Solyc02g037530.2
I
0.707
Solyc03g031970.2
Solanum lycopersicum
Solyc03g031970.2
I
0.707
Ca_08872
Cicer arietinum
Ca_08872
I
0.707
Cla009963
Citrullus lanatus
Cla009963
I
0.707
Pm014818
Prunus mume
Pm014818
I
0.707
cassava29103.valid.m1
Manihot esculenta
cassava29103.valid.m1
I
0.707
cassava29104.valid.m1
Manihot esculenta
cassava29104.valid.m1
I
0.707
cassava32201.m1
Manihot esculenta
cassava32201.m1
I
0.707
Cucsa.047990
Cucumis sativus
Cucsa.047990
I
0.707
mgf005961m
Mimulus guttatus
mgf005961m
I
0.707
mgf007038m
Mimulus guttatus
mgf007038m
I
0.707
Ciclev10014198m.g
Citrus clementina
Ciclev10014198m.g
I
0.707
Ciclev10014200m.g
Citrus clementina
Ciclev10014200m.g
I
0.707
Eucgr.A02065
Eucalyptus grandis
Eucgr.A02065
I
0.707
evm.TU.supercontig_17.53
Carica papaya
evm.TU.supercontig_17.53
I
0.707
gene22728-v1.0-hybrid
Fragaria vesca
gene22728-v1.0-hybrid
I
0.707
Gorai.008G054600
Gossypium raimondii
Gorai.008G054600
I
0.707
Gorai.011G048200
Gossypium raimondii
Gorai.011G048200
I
0.707
Lus10020804.g
Linum usitatissimum
Lus10020804.g
I
0.707
MDP0000153538
Malus domestica
MDP0000153538
I
0.707
MDP0000319957
Malus domestica
MDP0000319957
I
0.707
orange1.1g002390m.g
Citrus sinensis
orange1.1g002390m.g
I
0.707
orange1.1g002624m.g
Citrus sinensis
orange1.1g002624m.g
I
0.707
Pavir.Db00366
Panicum virgatum
Pavir.Db00366
I
0.707
SapurV1A.0030s0180
Salix purpurea
SapurV1A.0030s0180
I
0.707
SapurV1A.0289s0180
Salix purpurea
SapurV1A.0289s0180
I
0.707
SapurV1A.1257s0090
Salix purpurea
SapurV1A.1257s0090
I
0.707
PK27862.1
Cannabis sativa
PK27862.1
I
0.707
BRADI1G32547
Brachypodium distachyon
BRADI1G32547
I
0.704
Eucgr.D00264
Eucalyptus grandis
Eucgr.D00264
I
0.704
GSMUA_Achr5G02450_001
Musa acuminata
GSMUA_Achr5G02450_001
I
0.701