CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
30170.m013943
(
Ricinus communis
)
B3
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02362 (B3)
IPR003340
30170.m013943
T022203_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
30170.m013943
B3
18
109
FFEIFSSNLSSDRLRIPARFTRHLEGRTSGSVSLTGPSGNIWTVNLIQQSEDIFFDHGWPVFVKDHFIACGDLLLFRFDGELCFTVQVFDQS
30170.m013943
B3
243
339
FVRIMKRFNISGSYTLNIPYQFSTAHLPSSKTEIVLRTIKGACWTVNSVPTTRVHTSHTFCGGWMAFVRSNDIKIGDVCIFELVRKYELRVFILRVG
30170.m013943
B3
463
557
FVRIMRKFNISGSYTLKIPHQFSAAHLPNYKTEIILRNSHGERWTVNSVPDSKGRTVHTFCGGWMAFVRDNDVKEGDICMFELVTECEMLVHISG
Links
Other
B3
family TFs
Other
Ricinus communis
TFs
3 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
POPTR_0014s03610
Populus trichocarpa
POPTR_0014s03610
N
0.755
SapurV1A.0525s0070
Salix purpurea
SapurV1A.0525s0070
N
0.735
Lus10032748.g
Linum usitatissimum
Lus10032748.g
N
0.712