cassava41779.m1 (Manihot esculenta)
B3

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02362 (B3) IPR003340 cassava41779.m1 T022288_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ARF2
M06714_2.00 		Arabidopsis thaliana
NHTGTCKSHD
HDSMGACADN		 Dap-seq
OMalley et al.(2016)
ARF2_col_v31 		0.722 0.722
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
cassava41779.m1 B3 127 184

Links

Other B3 family TFs
Other Manihot esculenta TFs

75 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Ca_05681 Cicer arietinum Ca_05681 I 0.759
POPTR_0015s11660 Populus trichocarpa POPTR_0015s11660 I 0.741
Solyc03g118290.2 Solanum lycopersicum Solyc03g118290.2 I 0.741
ARF2 Vitis vinifera VIT_17s0000g00320 I 0.741
Cucsa.156920 Cucumis sativus Cucsa.156920 I 0.741
mgf006511m Mimulus guttatus mgf006511m I 0.741
mgf015308m Mimulus guttatus mgf015308m I 0.741
mgf020855m Mimulus guttatus mgf020855m I 0.741
gene06434-v1.0-hybrid Fragaria vesca gene06434-v1.0-hybrid I 0.741
Gorai.001G054600 Gossypium raimondii Gorai.001G054600 I 0.741
Gorai.008G210200 Gossypium raimondii Gorai.008G210200 I 0.741
MDP0000258032 Malus domestica MDP0000258032 I 0.741
PK16974.1 Cannabis sativa PK16974.1 I 0.741
LjSGA_068216.1 Lotus japonicus LjSGA_068216.1 I 0.741
AMTR_s00057p00141830 Amborella trichopoda AMTR_s00057p00141830 I 0.722
ARF2 Arabidopsis thaliana AT5G62000 D 0.722
Bo2g161810 Brassica oleracea Bo2g161810 I 0.722
Bo9g014770 Brassica oleracea Bo9g014770 I 0.722
Bra029293 Brassica rapa Bra029293 I 0.722
Bra035910 Brassica rapa Bra035910 I 0.722
BRADI2G59480 Brachypodium distachyon BRADI2G59480 I 0.722
F775_32662 Aegilops tauschii F775_32662 I 0.722
GLYMA04G37760 Glycine max GLYMA04G37760 I 0.722
GLYMA05G38540 Glycine max GLYMA05G38540 I 0.722
GLYMA06G17320 Glycine max GLYMA06G17320 I 0.722
GLYMA08G01100 Glycine max GLYMA08G01100 I 0.722
GRMZM2G006042 Zea mays GRMZM2G006042 I 0.722
GRMZM2G352159 Zea mays GRMZM2G352159 I 0.722
GSMUA_Achr10G12070_001 Musa acuminata GSMUA_Achr10G12070_001 I 0.722
GSMUA_Achr6G07390_001 Musa acuminata GSMUA_Achr6G07390_001 I 0.722
GSMUA_Achr6G08090_001 Musa acuminata GSMUA_Achr6G08090_001 I 0.722
MLOC_68907 Hordeum vulgare MLOC_68907 I 0.722
OB12G20020 Oryza brachyantha OB12G20020 I 0.722
PGSC0003DMG400014452 Solanum tuberosum PGSC0003DMG400014452 I 0.722
POPTR_0012s10790 Populus trichocarpa POPTR_0012s10790 I 0.722
PRUPE_ppa001392mg Prunus persica PRUPE_ppa001392mg I 0.722
ARF2 Arabidopsis lyrata scaffold_802850.1 I 0.722
Si021216m.g Setaria italica Si021216m.g I 0.722
Solyc12g042070.1 Solanum lycopersicum Solyc12g042070.1 I 0.722
TRAES3BF001100080CFD_g Triticum aestivum TRAES3BF001100080CFD_g I 0.722
Cla019614 Citrullus lanatus Cla019614 I 0.722
Pm024588 Prunus mume Pm024588 I 0.722
Bostr.26833s0038 Boechera stricta Bostr.26833s0038 I 0.722
Cagra.4553s0009 Capsella grandiflora Cagra.4553s0009 I 0.722
Carubv10025860m.g Capsella rubella Carubv10025860m.g I 0.722
Eucgr.B03551 Eucalyptus grandis Eucgr.B03551 I 0.722
MDP0000310875 Malus domestica MDP0000310875 I 0.722
Pavir.Cb00753 Panicum virgatum Pavir.Cb00753 I 0.722
Pavir.J11622 Panicum virgatum Pavir.J11622 I 0.722
Thhalv10003641m.g Eutrema salsugineum Thhalv10003641m.g I 0.722
chr4.CM0175.280.nc Lotus japonicus chr4.CM0175.280.nc I 0.722
BGIOSGA005099 Oryza indica BGIOSGA005099 I 0.704
Bo3g108130 Brassica oleracea Bo3g108130 I 0.704
Bra010048 Brassica rapa Bra010048 I 0.704
F775_31280 Aegilops tauschii F775_31280 I 0.704
GLYMA03G17450 Glycine max GLYMA03G17450 I 0.704
GRMZM2G338259 Zea mays GRMZM2G338259 I 0.704
OBART01G42570 Oryza barthii OBART01G42570 I 0.704
OMERI01G39560 Oryza meridionalis OMERI01G39560 I 0.704
ONIVA01G48620 Oryza nivara ONIVA01G48620 I 0.704
ORGLA01G0363100 Oryza glaberrima ORGLA01G0363100 I 0.704
ORUFI01G45980 Oryza rufipogon ORUFI01G45980 I 0.704
ARF4 Oryza sativa OS01G0927600 I 0.704
PGSC0003DMG400020711 Solanum tuberosum PGSC0003DMG400020711 I 0.704
Sb03g044630 Sorghum bicolor Sb03g044630 I 0.704
Si000340m.g Setaria italica Si000340m.g I 0.704
TRIUR3_17755 Triticum urartu TRIUR3_17755 I 0.704
VIT_07s0104g01230 Vitis vinifera VIT_07s0104g01230 I 0.704
Eucgr.G00076 Eucalyptus grandis Eucgr.G00076 I 0.704
Lus10032541.g Linum usitatissimum Lus10032541.g I 0.704
Lus10043200.g Linum usitatissimum Lus10043200.g I 0.704
Pavir.Ea03860 Panicum virgatum Pavir.Ea03860 I 0.704
Pavir.Eb03734 Panicum virgatum Pavir.Eb03734 I 0.704
SapurV1A.0340s0160 Salix purpurea SapurV1A.0340s0160 I 0.704
PDK_20s1585531g001 Phoenix dactylifera PDK_20s1585531g001 I 0.704