Bostr.1040s0030 (Boechera stricta)
B3

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02362 (B3) IPR003340 Bostr.1040s0030 T022618_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ARF2
M06714_2.00 		Arabidopsis thaliana
NHTGTCKSHD
HDSMGACADN		 Dap-seq
OMalley et al.(2016)
ARF2_col_v31 		0.704 0.704
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bostr.1040s0030.1.p B3 114 216

Links

Other B3 family TFs
Other Boechera stricta TFs

209 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Bostr.15774s0314 Boechera stricta Bostr.15774s0314 N 0.898
MTR_4g021580 Medicago truncatula MTR_4g021580 I 0.796
fgenesh2_kg.1__3608__AT1G35540.1 Arabidopsis lyrata fgenesh2_kg.1__3608__AT1G35540.1 N 0.786
ARF11 Arabidopsis thaliana AT2G46530 I 0.776
fgenesh1_pm.C_scaffold_3002720 Arabidopsis lyrata fgenesh1_pm.C_scaffold_3002720 N 0.776
GLYMA01G25270 Glycine max GLYMA01G25270 I 0.776
POPTR_0001s10900 Populus trichocarpa POPTR_0001s10900 I 0.776
POPTR_0003s14200 Populus trichocarpa POPTR_0003s14200 I 0.776
TCM_005126 Theobroma cacao TCM_005126 I 0.776
Ca_21948 Cicer arietinum Ca_21948 I 0.776
30068.m002516 Ricinus communis 30068.m002516 I 0.776
Bostr.25993s0113 Boechera stricta Bostr.25993s0113 I 0.776
Cagra.0050s0046 Capsella grandiflora Cagra.0050s0046 I 0.776
Carubv10022841m.g Capsella rubella Carubv10022841m.g I 0.776
Gorai.008G126200 Gossypium raimondii Gorai.008G126200 I 0.776
SapurV1A.0035s0230 Salix purpurea SapurV1A.0035s0230 I 0.776
SapurV1A.0003s1010 Salix purpurea SapurV1A.0003s1010 I 0.773
Bo3g039330 Brassica oleracea Bo3g039330 I 0.765
fgenesh1_pg.C_scaffold_1003068 Arabidopsis lyrata fgenesh1_pg.C_scaffold_1003068 N 0.765
GLYMA03G17450 Glycine max GLYMA03G17450 I 0.765
POPTR_0014s09560 Populus trichocarpa POPTR_0014s09560 I 0.765
ARF11 Arabidopsis lyrata scaffold_403621.1 I 0.765
cassava42787.valid.m1 Manihot esculenta cassava42787.valid.m1 I 0.765
cassava42788.valid.m1 Manihot esculenta cassava42788.valid.m1 I 0.765
cassava42789.valid.m1 Manihot esculenta cassava42789.valid.m1 I 0.765
cassava43609.valid.m1 Manihot esculenta cassava43609.valid.m1 I 0.765
cassava45422.m1 Manihot esculenta cassava45422.m1 I 0.765
cassava45423.m1 Manihot esculenta cassava45423.m1 I 0.765
cassava45424.m1 Manihot esculenta cassava45424.m1 I 0.765
cassava45425.m1 Manihot esculenta cassava45425.m1 I 0.765
cassava45426.m1 Manihot esculenta cassava45426.m1 I 0.765
Cucsa.078800 Cucumis sativus Cucsa.078800 I 0.765
Cucsa.114840 Cucumis sativus Cucsa.114840 I 0.765
evm.TU.supercontig_96.40 Carica papaya evm.TU.supercontig_96.40 I 0.765
Gorai.001G153900 Gossypium raimondii Gorai.001G153900 I 0.765
Gorai.003G078000 Gossypium raimondii Gorai.003G078000 I 0.765
Gorai.007G026900 Gossypium raimondii Gorai.007G026900 I 0.765
Lus10023058.g Linum usitatissimum Lus10023058.g I 0.765
Lus10032413.g Linum usitatissimum Lus10032413.g I 0.765
Thhalv10001365m.g Eutrema salsugineum Thhalv10001365m.g I 0.765
PK02218.1 Cannabis sativa PK02218.1 I 0.765
LjSGA_059323.1 Lotus japonicus LjSGA_059323.1 I 0.765
Bra013748 Brassica rapa Bra013748 I 0.755
GLYMA07G16170 Glycine max GLYMA07G16170 I 0.755
GLYMA18G40180 Glycine max GLYMA18G40180 I 0.755
POPTR_0002s17350 Populus trichocarpa POPTR_0002s17350 I 0.755
PRUPE_ppa002230mg Prunus persica PRUPE_ppa002230mg I 0.755
TCM_016500 Theobroma cacao TCM_016500 I 0.755
VIT_15s0046g00290 Vitis vinifera VIT_15s0046g00290 I 0.755
Pm018352 Prunus mume Pm018352 I 0.755
mgf005549m Mimulus guttatus mgf005549m I 0.755
Bostr.13158s0186 Boechera stricta Bostr.13158s0186 I 0.755
Ciclev10019131m.g Citrus clementina Ciclev10019131m.g I 0.755
MDP0000194603 Malus domestica MDP0000194603 I 0.755
orange1.1g005491m.g Citrus sinensis orange1.1g005491m.g I 0.755
SapurV1A.0013s0230 Salix purpurea SapurV1A.0013s0230 I 0.755
PK07332.1 Cannabis sativa PK07332.1 I 0.755
ARF14 Arabidopsis thaliana AT1G35540 N 0.745
ARF18 Arabidopsis thaliana AT3G61830 I 0.745
Bo01141s010 Brassica oleracea Bo01141s010 I 0.745
Bo1g037360 Brassica oleracea Bo1g037360 I 0.745
Bo4g008150 Brassica oleracea Bo4g008150 I 0.745
Bo7g109250 Brassica oleracea Bo7g109250 I 0.745
Bo8g097320 Brassica oleracea Bo8g097320 I 0.745
Bra004530 Brassica rapa Bra004530 I 0.745
Bra014419 Brassica rapa Bra014419 I 0.745
Bra019255 Brassica rapa Bra019255 I 0.745
ARF18 Arabidopsis lyrata fgenesh1_pg.C_scaffold_5002633 I 0.745
GLYMA03G41920 Glycine max GLYMA03G41920 I 0.745
PRUPE_ppa002617mg Prunus persica PRUPE_ppa002617mg I 0.745
VIT_02s0025g01740 Vitis vinifera VIT_02s0025g01740 I 0.745
Ca_23296 Cicer arietinum Ca_23296 I 0.745
Cla013021 Citrullus lanatus Cla013021 I 0.745
Pm024149 Prunus mume Pm024149 I 0.745
cassava29828.valid.m1 Manihot esculenta cassava29828.valid.m1 I 0.745
Cagra.0483s0062 Capsella grandiflora Cagra.0483s0062 I 0.745
Carubv10011010m.g Capsella rubella Carubv10011010m.g N 0.745
Carubv10018954m.g Capsella rubella Carubv10018954m.g I 0.745
Eucgr.D01764 Eucalyptus grandis Eucgr.D01764 I 0.745
gene25123-v1.0-hybrid Fragaria vesca gene25123-v1.0-hybrid I 0.745
MDP0000139073 Malus domestica MDP0000139073 I 0.745
SapurV1A.1529s0070 Salix purpurea SapurV1A.1529s0070 I 0.745
TCM_029792 Theobroma cacao TCM_029792 I 0.736
ARF9 Arabidopsis lyrata Al_scaffold_0007_1752 I 0.735
ARF12 Arabidopsis thaliana AT1G34310 N 0.735
ARF9 Arabidopsis thaliana AT4G23980 I 0.735
GLYMA07G06060 Glycine max GLYMA07G06060 I 0.735
GLYMA16G02650 Glycine max GLYMA16G02650 I 0.735
MTR_7g062540 Medicago truncatula MTR_7g062540 I 0.735
PGSC0003DMG400000118 Solanum tuberosum PGSC0003DMG400000118 I 0.735
TCM_008374 Theobroma cacao TCM_008374 I 0.735
Aquca_013_00067 Aquilegia coerulea Aquca_013_00067 I 0.735
Bostr.7867s0204 Boechera stricta Bostr.7867s0204 I 0.735
Carubv10011321m.g Capsella rubella Carubv10011321m.g N 0.735
Carubv10012424m.g Capsella rubella Carubv10012424m.g N 0.735
Eucgr.E00888 Eucalyptus grandis Eucgr.E00888 I 0.735
gene19138-v1.0-hybrid Fragaria vesca gene19138-v1.0-hybrid I 0.735
Thhalv10005857m.g Eutrema salsugineum Thhalv10005857m.g I 0.735
Thhalv10024554m.g Eutrema salsugineum Thhalv10024554m.g I 0.735
ARF22 Arabidopsis thaliana AT1G34390 N 0.729
chr1.LjT43L07.10.nd Lotus japonicus chr1.LjT43L07.10.nd I 0.729
Solyc01g096070.2 Solanum lycopersicum Solyc01g096070.2 I 0.727
AMTR_s00057p00141830 Amborella trichopoda AMTR_s00057p00141830 I 0.724
ARF23 Oryza indica BGIOSGA033901 I 0.724
BRADI4G17410 Brachypodium distachyon BRADI4G17410 I 0.724
GSMUA_Achr10G15100_001 Musa acuminata GSMUA_Achr10G15100_001 I 0.724
LPERR11G11950 Leersia perrieri LPERR11G11950 I 0.724
LPERR12G09930 Leersia perrieri LPERR12G09930 I 0.724
OB11G21910 Oryza brachyantha OB11G21910 I 0.724
OBART11G15270 Oryza barthii OBART11G15270 I 0.724
OGLUM11G14710 Oryza glumaepatula OGLUM11G14710 I 0.724
OLONG_022378 Oryza longistaminata OLONG_022378 I 0.724
OMERI11G12590 Oryza meridionalis OMERI11G12590 I 0.724
ONIVA12G10760 Oryza nivara ONIVA12G10760 I 0.724
OPUNC11G12650 Oryza punctata OPUNC11G12650 I 0.724
ORGLA11G0129300 Oryza glaberrima ORGLA11G0129300 I 0.724
ORUFI11G16290 Oryza rufipogon ORUFI11G16290 I 0.724
OS11G0523800 Oryza sativa OS11G0523800 I 0.724
PGSC0003DMG400012261 Solanum tuberosum PGSC0003DMG400012261 I 0.724
VIT_01s0244g00150 Vitis vinifera VIT_01s0244g00150 I 0.724
Ciclev10019174m.g Citrus clementina Ciclev10019174m.g I 0.724
evm.TU.supercontig_15.1 Carica papaya evm.TU.supercontig_15.1 I 0.724
Gorai.008G210200 Gossypium raimondii Gorai.008G210200 I 0.724
orange1.1g005368m.g Citrus sinensis orange1.1g005368m.g I 0.724
GLYMA04G37760 Glycine max GLYMA04G37760 I 0.714
GLYMA06G17320 Glycine max GLYMA06G17320 I 0.714
GRMZM2G006042 Zea mays GRMZM2G006042 I 0.714
GRMZM2G116557 Zea mays GRMZM2G116557 I 0.714
GRMZM2G352159 Zea mays GRMZM2G352159 I 0.714
GSMUA_Achr6G07390_001 Musa acuminata GSMUA_Achr6G07390_001 I 0.714
MTR_8g100050 Medicago truncatula MTR_8g100050 I 0.714
OB12G20020 Oryza brachyantha OB12G20020 I 0.714
POPTR_0012s10790 Populus trichocarpa POPTR_0012s10790 I 0.714
POPTR_0015s11660 Populus trichocarpa POPTR_0015s11660 I 0.714
Sb08g014320 Sorghum bicolor Sb08g014320 I 0.714
Si021216m.g Setaria italica Si021216m.g I 0.714
Solyc03g118290.2 Solanum lycopersicum Solyc03g118290.2 I 0.714
ARF2 Vitis vinifera VIT_17s0000g00320 I 0.714
Cla019614 Citrullus lanatus Cla019614 I 0.714
cassava17839.valid.m1 Manihot esculenta cassava17839.valid.m1 I 0.714
cassava17840.valid.m1 Manihot esculenta cassava17840.valid.m1 I 0.714
cassava37256.valid.m1 Manihot esculenta cassava37256.valid.m1 I 0.714
Cucsa.156920 Cucumis sativus Cucsa.156920 I 0.714
mgf006511m Mimulus guttatus mgf006511m I 0.714
mgf015308m Mimulus guttatus mgf015308m I 0.714
Ciclev10030696m.g Citrus clementina Ciclev10030696m.g I 0.714
Eucgr.B03551 Eucalyptus grandis Eucgr.B03551 I 0.714
gene06434-v1.0-hybrid Fragaria vesca gene06434-v1.0-hybrid I 0.714
Gorai.001G054600 Gossypium raimondii Gorai.001G054600 I 0.714
Gorai.007G109500 Gossypium raimondii Gorai.007G109500 I 0.714
MDP0000258032 Malus domestica MDP0000258032 I 0.714
orange1.1g004792m.g Citrus sinensis orange1.1g004792m.g I 0.714
Pavir.Cb00753 Panicum virgatum Pavir.Cb00753 I 0.714
Pavir.J11622 Panicum virgatum Pavir.J11622 I 0.714
PK16974.1 Cannabis sativa PK16974.1 I 0.714
chr4.CM0175.280.nc Lotus japonicus chr4.CM0175.280.nc I 0.714
LjSGA_068216.1 Lotus japonicus LjSGA_068216.1 I 0.714
PDK_20s1477241g001 Phoenix dactylifera PDK_20s1477241g001 I 0.708
ARF20 Arabidopsis thaliana AT1G35240 N 0.704
ARF2 Arabidopsis thaliana AT5G62000 D 0.704
Bo2g161810 Brassica oleracea Bo2g161810 I 0.704
Bo3g108130 Brassica oleracea Bo3g108130 I 0.704
Bo9g014770 Brassica oleracea Bo9g014770 I 0.704
Bra010048 Brassica rapa Bra010048 I 0.704
Bra035910 Brassica rapa Bra035910 I 0.704
F775_31280 Aegilops tauschii F775_31280 I 0.704
GLYMA05G38540 Glycine max GLYMA05G38540 I 0.704
GLYMA07G32300 Glycine max GLYMA07G32300 I 0.704
GLYMA08G01100 Glycine max GLYMA08G01100 I 0.704
GLYMA13G24240 Glycine max GLYMA13G24240 I 0.704
GRMZM2G338259 Zea mays GRMZM2G338259 I 0.704
GSMUA_Achr10G12070_001 Musa acuminata GSMUA_Achr10G12070_001 I 0.704
GSMUA_AchrUn_randomG11300_001 Musa acuminata GSMUA_AchrUn_randomG11300_001 I 0.704
PGSC0003DMG400014179 Solanum tuberosum PGSC0003DMG400014179 I 0.704
PGSC0003DMG400014452 Solanum tuberosum PGSC0003DMG400014452 I 0.704
PGSC0003DMG400020711 Solanum tuberosum PGSC0003DMG400020711 I 0.704
POPTR_0004s23770 Populus trichocarpa POPTR_0004s23770 I 0.704
PRUPE_ppa001392mg Prunus persica PRUPE_ppa001392mg I 0.704
Sb03g044630 Sorghum bicolor Sb03g044630 I 0.704
ARF2 Arabidopsis lyrata scaffold_802850.1 I 0.704
Si000340m.g Setaria italica Si000340m.g I 0.704
Solyc12g042070.1 Solanum lycopersicum Solyc12g042070.1 I 0.704
TCM_014743 Theobroma cacao TCM_014743 I 0.704
ARF1 Vitis vinifera VIT_12s0035g01800 I 0.704
Ca_05681 Cicer arietinum Ca_05681 I 0.704
Pm024588 Prunus mume Pm024588 I 0.704
mgf020855m Mimulus guttatus mgf020855m I 0.704
Bostr.26833s0038 Boechera stricta Bostr.26833s0038 I 0.704
Cagra.4553s0009 Capsella grandiflora Cagra.4553s0009 I 0.704
Carubv10025860m.g Capsella rubella Carubv10025860m.g I 0.704
Ciclev10014391m.g Citrus clementina Ciclev10014391m.g I 0.704
Lus10032541.g Linum usitatissimum Lus10032541.g I 0.704
Lus10043200.g Linum usitatissimum Lus10043200.g I 0.704
MDP0000310875 Malus domestica MDP0000310875 I 0.704
orange1.1g004106m.g Citrus sinensis orange1.1g004106m.g I 0.704
Pavir.Ea03860 Panicum virgatum Pavir.Ea03860 I 0.704
Pavir.Eb03734 Panicum virgatum Pavir.Eb03734 I 0.704
SapurV1A.0422s0040 Salix purpurea SapurV1A.0422s0040 I 0.704
SapurV1A.0517s0240 Salix purpurea SapurV1A.0517s0240 I 0.704
SapurV1A.0672s0210 Salix purpurea SapurV1A.0672s0210 I 0.704
SapurV1A.0774s0040 Salix purpurea SapurV1A.0774s0040 I 0.704
Thhalv10003641m.g Eutrema salsugineum Thhalv10003641m.g I 0.704
PK12669.1 Cannabis sativa PK12669.1 I 0.704
PDK_20s1585531g001 Phoenix dactylifera PDK_20s1585531g001 I 0.704
GLYMA16G00220 Glycine max GLYMA16G00220 I 0.701
GSMUA_Achr9G08310_001 Musa acuminata GSMUA_Achr9G08310_001 I 0.701
MTR_2g005240 Medicago truncatula MTR_2g005240 I 0.701
MDP0000929655 Malus domestica MDP0000929655 I 0.701
LjSGA_022281.1 Lotus japonicus LjSGA_022281.1 I 0.701