Cagra.0844s0024 (Capsella grandiflora)
B3

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02362 (B3) IPR003340 Cagra.0844s0024 T022732_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
AT4G33280
M06709_2.00 		Arabidopsis thaliana
WWTWYKKTTTTGGCGGGAAAA
TTTTCCCGCCAAAAMMRWAWW		 Dap-seq
OMalley et al.(2016)
REM16_col_a 		0.792 0.792
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Cagra.0844s0024.1.p B3 29 116
Cagra.0844s0024.1.p B3 274 371

Links

Other B3 family TFs
Other Capsella grandiflora TFs

2 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AT4G33280 Arabidopsis thaliana AT4G33280 D 0.792
Al_scaffold_0007_749 Arabidopsis lyrata Al_scaffold_0007_749 I 0.786