CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Cagra.1424s0006
(
Capsella grandiflora
)
B3
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02362 (B3)
IPR003340
Cagra.1424s0006
T022752_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Cagra.1424s0006.1.p
B3
6
94
FFKPLLPGFHSHLTIPVGFFLKYIEGRDEQKSTAELTSDVSKIIWNVKIDGQRFTDGWEEFATAHDLRIGDIAIFRQERHLAFHVTLLG
Cagra.1424s0006.1.p
B3
132
230
CFVAKVAPSSIRYDLLLFPRPFVRANSRVINGFGEIVLMNEKGRTWTFKLHKKPACGNVYIRGGWRVFCDANGLKDGDTFTFKLIQRGGTRVLRLVPKE
Cagra.1424s0006.1.p
B3
279
353
CFVANISPSMLRYDTMYLPKWFMRENGIDGRCGDMILLNEKGRSWTLDLRRKSCGTAFLRGWRSFCLDNGLRAKM
Cagra.1424s0006.1.p
B3
350
436
RAKMRFPIPFTRTNGINKETKMALLDKQGRKWSTKLRSEGANSERLRLVGGWKGFLEANGVKANESIKLELIWEEETSCVLKFRSKV
Links
Other
B3
family TFs
Other
Capsella grandiflora
TFs
1 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Carubv10022918m.g
Capsella rubella
Carubv10022918m.g
N
0.892