CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Carubv10004562m.g
(
Capsella rubella
)
B3
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02362 (B3)
IPR003340
Carubv10004562m.g
T022834_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Carubv10004562m
B3
14
103
FFKPILPGFNTSILIPEAFYSNYLEGRQEGNTAELRSDMSEMTWIIKMDGRRLSKGWEKFAEAHNLQVGDILVFRHEGNLLFHVTTFGQS
Carubv10004562m
B3
145
241
FVVPVTASNQRLDSVCLPRGFTNSSGLSKLCNEMILMDEKGRPSKIKLCYKESTNRFCASRGWRAFCCKNGHQTGCFLRLILVRNGKTPVLRVFPLE
Carubv10004562m
B3
296
392
FVVPVTASNQRLDSFNLPKGLTTSSGLSKLCKEIVFMDERGRTSILNLSYDKSSCRFKVRRGWRAFCCRNGHEIGSFLKLILVRNGKTPILRIFPLE
Carubv10004562m
B3
426
521
CFVVSVTVSNLREDRLYLPVRLSRSNILKGKFHEINLMNKHGRTWTLSLKYSKCSRKFSISRGWKCFCEANGQKPGCTFLFKLVRNRKAPVLLMTS
Links
Other
B3
family TFs
Other
Capsella rubella
TFs
2 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Cagra.0120s0003
Capsella grandiflora
Cagra.0120s0003
N
0.955
AT5G32460
Arabidopsis thaliana
AT5G32460
N
0.734