CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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gene15053-v1.0-hybrid
(
Fragaria vesca
)
B3
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02362 (B3)
IPR003340
gene15053-v1.0-hybrid
T023210_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
mrna15053.1-v1.0-hybrid
B3
18
109
FFAFFSADLSSDRLKIPERFMIHMEGRTSGVVVLSGPSGNVWNVHLIEQNGDLFFHYGWPAFVRDHSLECGDFLIFRYDGELHFTVQVFDQT
mrna15053.1-v1.0-hybrid
B3
174
274
QAIQNSLNDRNSMQITPAHENIPYKFSVAHLPNCKVKIVLLNLKGESWTVNSVPTTRVHTSHTLCGGWMAFVRYNDIKLGDICVFELVRECEFRVHIQTGE
mrna15053.1-v1.0-hybrid
B3
378
474
FVKIMKKFNISGSYTLKIPYQFSTEHLPNFKTEIVLQNSKGESWTVNSVPDSKGRVVHTFCGGWMAFVRGNNINIGDICIFELVGKREMRVHISGAD
Links
Other
B3
family TFs
Other
Fragaria vesca
TFs
2 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
PRUPE_ppa003541mg
Prunus persica
PRUPE_ppa003541mg
N
0.834
PK10894.1
Cannabis sativa
PK10894.1
N
0.701