CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Pavir.Ga00232
(
Panicum virgatum
)
B3
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02362 (B3)
IPR003340
Pavir.Ga00232
T023862_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Pavir.Ga00232.1.p
B3
296
398
LRKDLTNSDVGNIGRIVLPKKDAEPNLPVLEDKDGLILEMDDFELPAVWKFKYRYWPNNKSRMYILETTGEFVKKHGLQAKDILVIYKNKKSGRYVARAVKAE
Links
Other
B3
family TFs
Other
Panicum virgatum
TFs
5 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Si025187m.g
Setaria italica
Si025187m.g
N
0.816
Pavir.Gb00057
Panicum virgatum
Pavir.Gb00057
N
0.796
Sb06g032870
Sorghum bicolor
Sb06g032870
N
0.778
GRMZM2G149940
Zea mays
GRMZM2G149940
N
0.765
BRADI5G26100
Brachypodium distachyon
BRADI5G26100
N
0.735