CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Pavir.Ga02236
(
Panicum virgatum
)
B3
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02362 (B3)
IPR003340
Pavir.Ga02236
T023866_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Pavir.Ga02236.1.p
B3
16
108
HLKVLLPSSTSHKLRISDELARHWDGGAGGTALVVSPLGKVWRVQVARDAGGAFLGRGWPEFAAAHGFGAGWFLVFRHEPGAGVLTVKAFDTT
Pavir.Ga02236.1.p
B3
135
229
FINVLLPPSMEKMGIPPKFVKNYISEVEMGSSVTVLLSPLSKFCRVTVGKDQSSGNLFFSGGWSRFLASNGITEYDVLLLRYEGNMVFTVKVFGP
Pavir.Ga02236.1.p
B3
314
412
WMKKEISSSTLWKRLSVPRNFCKAIGLWRTSEVTLRTTAYEDHGHRSWQVRFLFYENRNSGELSRGWRRFCTDNRIKEGDICTFNVIETTLWHVDITRH
Pavir.Ga02236.1.p
B3
485
582
WLKREISAHMLSDQLYVPRNFYKAIGLYRASGITLRTTANEDHGLRSWQVRFLVYRNRGTLTRGWRTFWADNMIKEGDICTFNIIKPMLWHVDIMRHS
Pavir.Ga02236.2.p
B3
141
239
WMKKEISSSTLWKRLSVPRNFCKAIGLWRTSEVTLRTTAYEDHGHRSWQVRFLFYENRNSGELSRGWRRFCTDNRIKEGDICTFNVIETTLWHVDITRH
Pavir.Ga02236.2.p
B3
295
392
WLKREISAHMLSDQLYVPRNFYKAIGLYRASGITLRTTANEDHGLRSWQVRFLVYRNRGTLTRGWRTFWADNMIKEGDICTFNIIKPMLWHVDIMRHS
Pavir.Ga02236.3.p
B3
141
239
WMKKEISSSTLWKRLSVPRNFCKAIGLWRTSEVTLRTTAYEDHGHRSWQVRFLFYENRNSGELSRGWRRFCTDNRIKEGDICTFNVIETTLWHVDITRH
Pavir.Ga02236.3.p
B3
312
409
WLKREISAHMLSDQLYVPRNFYKAIGLYRASGITLRTTANEDHGLRSWQVRFLVYRNRGTLTRGWRTFWADNMIKEGDICTFNIIKPMLWHVDIMRHS
Pavir.Ga02236.4.p
B3
141
239
WMKKEISSSTLWKRLSVPRNFCKAIGLWRTSEVTLRTTAYEDHGHRSWQVRFLFYENRNSGELSRGWRRFCTDNRIKEGDICTFNVIETTLWHVDITRH
Pavir.Ga02236.5.p
B3
141
239
WMKKEISSSTLWKRLSVPRNFCKAIGLWRTSEVTLRTTAYEDHGHRSWQVRFLFYENRNSGELSRGWRRFCTDNRIKEGDICTFNVIETTLWHVDITRH
Pavir.Ga02236.6.p
B3
141
239
WMKKEISSSTLWKRLSVPRNFCKAIGLWRTSEVTLRTTAYEDHGHRSWQVRFLFYENRNSGELSRGWRRFCTDNRIKEGDICTFNVIETTLWHVDITRH
Pavir.Ga02236.7.p
B3
16
108
HLKVLLPSSTSHKLRISDELARHWDGGAGGTALVVSPLGKVWRVQVARDAGGAFLGRGWPEFAAAHGFGAGWFLVFRHEPGAGVLTVKAFDTT
Pavir.Ga02236.7.p
B3
135
229
FINVLLPPSMEKMGIPPKFVKNYISEVEMGSSVTVLLSPLSKFCRVTVGKDQSSGNLFFSGGWSRFLASNGITEYDVLLLRYEGNMVFTVKVFGP
Pavir.Ga02236.7.p
B3
314
412
WMKKEISSSTLWKRLSVPRNFCKAIGLWRTSEVTLRTTAYEDHGHRSWQVRFLFYENRNSGELSRGWRRFCTDNRIKEGDICTFNVIETTLWHVDITRH
Links
Other
B3
family TFs
Other
Panicum virgatum
TFs
1 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action