CIS-BP Database: Catalog of Inferred Sequence Binding Preferences

TF Information

Pavir.Ga02445 *(Panicum virgatum)* B3
Pfam ID	Interpro ID	Gene ID	CIS-BP ID	Sequence source
PF02362 (B3)	IPR003340	Pavir.Ga02445	T023868_2.00	JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
No direct experiments
Motifs from related TFs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID	Domain	From	To	Sequence
Pavir.Ga02445.1.p	B3	1	86	MEKMGIPPKFVKNYISEVEMGSSVTVLLSPLSKFCHVTVGKDQSSGNLFFSGGWSRFLASNGVTEYDVLLLRYEGNMVFTVKVFGP
Pavir.Ga02445.1.p	B3	174	269	EISGCTLWKRLTIAGAFCKAIGLIWRTSEVTLRTTADKDHGHRSWQVGFLFYENRNSGVLTRGWRRFCTNNMIKEGDICTFNIIETALWHVDITRH
Pavir.Ga02445.1.p	B3	342	439	WLKREISAHILSAKLYVPRNFYMAIGLNRSSEITLRTTTNEDHGLRSWQVRFLVYRNRGTLTRGWRTFWADNMIKEGDICTFNVIETTLWHVDITRHR
Pavir.Ga02445.1.p	B3	511	608	LFKTEISAYILSLHLSVPRNFWKATGLCRTSDITLRTTANEDHGLRSWQVRFLVSGNHGMLTRGWRTFLVDNRIKEGDICTFKIIKTTLWHVDIMRHG
Pavir.Ga02445.2.p	B3	144	239	EISGCTLWKRLTIAGAFCKAIGLIWRTSEVTLRTTADKDHGHRSWQVGFLFYENRNSGVLTRGWRRFCTNNMIKEGDICTFNIIETALWHVDITRH
Pavir.Ga02445.2.p	B3	312	409	WLKREISAHILSAKLYVPRNFYMAIGLNRSSEITLRTTTNEDHGLRSWQVRFLVYRNRGTLTRGWRTFWADNMIKEGDICTFNVIETTLWHVDITRHR
Pavir.Ga02445.2.p	B3	481	578	LFKTEISAYILSLHLSVPRNFWKATGLCRTSDITLRTTANEDHGLRSWQVRFLVSGNHGMLTRGWRTFLVDNRIKEGDICTFKIIKTTLWHVDIMRHG

Links
Other B3 family TFs
Other *Panicum virgatum* TFs

1 Related TFs

Name	Species	Gene ID	Motif Evidence	SR Score	Action